YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264648, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	312 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264648, gi|....

Description	E-value	Query Range	Subject Range
gi\|3257095, gi\|1... - gi\|3257095\|dbj\|BAA29778.1\| 840aa long hypothetical cell division control protein (transitional endop... gi\|7435754 - pir\|\|H71114 probable cell division control protein (transitional endoplasmic reticulum ATPase) - Pyr...	4.0E-41	[4..312]	[407..741]
gi\|109116761 - gi\|109116761\|ref\|XP_001108909.1\| PREDICTED: similar to for proteasomal ATPase (SUG1) [Macaca mulatta...	6.0E-41	[14..311]	[92..417]
gi\|6513847 - gi\|6513847\|dbj\|BAA87866.1\| Pk-cdcA [Thermococcus kodakaraensis] gi\|57640604, gi\|... - gi\|6513847\|dbj\|BAA87866.1\| Pk-cdcA [Thermococcus kodakaraensis], gi\|57640604\|ref\|YP_183082.1\| cell d...	1.0E-40	[2..311]	[402..738]
gi\|25289928 - pir\|\|AF3276 ATP-dependent clp proteinase, ATP-binding chain clpb BMEI0195 [imported] - Brucella meli... gi\|17986479, gi\|... - gi\|17986479\|ref\|NP_539113.1\| ATP-dependent Clp protease, ATP-binding subunit CLPB [Brucella melitens...	1.0E-40	[1..312]	[499..824]
gi\|228723011, gi... - gi\|229048286\|ref\|ZP_04193854.1\| hypothetical protein bcere0027_42540 [Bacillus cereus AH676], gi\|228... gi\|228836276, gi... - gi\|228923322\|ref\|ZP_04086610.1\| hypothetical protein bthur0011_43010 [Bacillus thuringiensis serovar... gi\|30022654, gi\|... - gi\|30022654\|ref\|NP_834285.1\| primosomal protein DnaI [Bacillus cereus ATCC 14579], gi\|29898212\|gb\|AA... gi\|229129862, gi... - gi\|229129862\|ref\|ZP_04258828.1\| hypothetical protein bcere0015_43020 [Bacillus cereus BDRD-Cer4], gi... gi\|229112043, gi... - gi\|229112043\|ref\|ZP_04241586.1\| hypothetical protein bcere0018_42860 [Bacillus cereus Rock1-15], gi\|... gi\|229081830, gi... - gi\|229081830\|ref\|ZP_04214322.1\| hypothetical protein bcere0023_44580 [Bacillus cereus Rock4-2], gi\|2... gi\|229072080, gi... - gi\|229072080\|ref\|ZP_04205289.1\| hypothetical protein bcere0025_42460 [Bacillus cereus F65185], gi\|22... gi\|229192779, gi... - gi\|229192779\|ref\|ZP_04319737.1\| hypothetical protein bcere0002_44300 [Bacillus cereus ATCC 10876], g... gi\|229180897, gi... - gi\|229180897\|ref\|ZP_04308232.1\| hypothetical protein bcere0005_42410 [Bacillus cereus 172560W], gi\|2... gi\|228636248, gi... - gi\|229147138\|ref\|ZP_04275496.1\| hypothetical protein bcere0012_42740 [Bacillus cereus BDRD-ST24], gi... gi\|206969644, gi... - gi\|206969644\|ref\|ZP_03230598.1\| primosomal protein DnaI [Bacillus cereus AH1134], gi\|206735332\|gb\|ED...	2.0E-40	[1..312]	[1..312]
gi\|7435762, gi\|5... - pir\|\|D75046 transitional endoplasmic reticulum atpase PAB1478 - Pyrococcus abyssi (strain Orsay), gi... gi\|5458778, gi\|1... - gi\|5458778\|emb\|CAB50265.1\| ATPase of the AAA+ family [Pyrococcus abyssi GE5], gi\|14521559\|ref\|NP_127...	2.0E-40	[2..312]	[405..741]
gi\|110833340, gi... - gi\|110833340\|ref\|YP_692199.1\| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax bork...	3.0E-40	[1..308]	[441..766]
gi\|58580960, gi\|... - gi\|58580960\|ref\|YP_199976.1\| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae KACC1...	3.0E-40	[1..308]	[478..798]
gi\|49332892, gi\|... - gi\|49481336\|ref\|YP_038624.1\| primosomal protein DnaI [Bacillus thuringiensis serovar konkukian str. ... gi\|218905805, gi... - gi\|218905805\|ref\|YP_002453639.1\| primosomal protein DnaI [Bacillus cereus AH820], gi\|218538371\|gb\|AC... gi\|118479726, gi... - gi\|118479726\|ref\|YP_896877.1\| primosomal protein DnaI [Bacillus thuringiensis str. Al Hakam], gi\|118... gi\|228811290, gi... - gi\|228948303\|ref\|ZP_04110586.1\| hypothetical protein bthur0007_44290 [Bacillus thuringiensis serovar... gi\|228929625, gi... - gi\|228929625\|ref\|ZP_04092643.1\| hypothetical protein bthur0010_43090 [Bacillus thuringiensis serovar... gi\|52140930, gi\|... - gi\|52140930\|ref\|YP_085899.1\| primosomal protein DnaI [Bacillus cereus E33L], gi\|51974399\|gb\|AAU15949... gi\|228659446, gi... - gi\|229124144\|ref\|ZP_04253336.1\| hypothetical protein bcere0016_44290 [Bacillus cereus 95/8201], gi\|2...	3.0E-40	[1..312]	[1..312]
gi\|228903095, gi... - gi\|228903095\|ref\|ZP_04067231.1\| hypothetical protein bthur0014_42610 [Bacillus thuringiensis IBL 422... gi\|218544371, gi... - gi\|218899731\|ref\|YP_002448142.1\| primosomal protein DnaI [Bacillus cereus G9842], gi\|218544371\|gb\|AC... gi\|228792008, gi... - gi\|228967675\|ref\|ZP_04128695.1\| hypothetical protein bthur0004_44670 [Bacillus thuringiensis serovar... gi\|228910402, gi... - gi\|228910402\|ref\|ZP_04074217.1\| hypothetical protein bthur0013_45490 [Bacillus thuringiensis IBL 200... gi\|75763047, gi\|... - gi\|75763047\|ref\|ZP_00742835.1\| Primosomal protein dnaI [Bacillus thuringiensis serovar israelensis A...	8.0E-40	[1..312]	[1..312]

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Predicted Domain #1

Region A:
Residues: [1-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHIQNSFAK LMENENFKNR YEVLKAEVMA HPRVKEFIDE HRGEVTTSMI ERSLVKLYEY  60
   61 IGQSVGCADC PDLGSCKNML QGYEPKLVIQ GKMIDIQYDR CVRKVAYDER KKYEKLVQSV 120
  121 YMPTDILQAT MENLDPSDLD ARIDAIGAAN EFLSAYEPGK KVQGLYLYGK FGVGKTYLLG 180
  181 AIANELARKK ISSMLVYFPE FLREIKSSIQ DNSIGEKIDA VKRVQVLMLD DIGAEAMSSF 240
  241 VRDDVLGAIL QFRMLENLPT FFTSNFDFKQ LEHHLTYTQR GEAEEMKAAR IMERIKYLAK 300
  301 PIPIGGKNRR HK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.69897
Match:	2qgzA
Description:	No description for 2qgzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits