YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259188, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	329 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259188, gi|....

Description	E-value	Query Range	Subject Range
gi\|89200306, gi\|... - gi\|89200306\|ref\|ZP_01179060.1\| Porphobilinogen synthase [Bacillus cereus subsp. cytotoxis NVH 391-98...	0.0	[1..329]	[1..329]
gi\|42739528, gi\|... - gi\|42783599\|ref\|NP_980846.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus ATCC 10987], gi\|...	0.0	[1..329]	[1..329]
gi\|217961954, gi... - gi\|217961954\|ref\|YP_002340524.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus AH187], gi\|2... gi\|52141044, gi\|... - gi\|52141044\|ref\|YP_085785.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus E33L], gi\|519745...	0.0	[1..329]	[1..329]
gi\|163942210, gi... - gi\|89205262\|ref\|ZP_01183833.1\| Porphobilinogen synthase [Bacillus weihenstephanensis KBAB4], gi\|8915... gi\|229135307, gi... - gi\|229135307\|ref\|ZP_04264102.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus BDRD-ST196], ... gi\|228747599, gi... - gi\|229013677\|ref\|ZP_04170806.1\| Delta-aminolevulinic acid dehydratase [Bacillus mycoides DSM 2048], ... gi\|229169204, gi... - gi\|229169204\|ref\|ZP_04296918.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus AH621], gi\|22...	0.0	[1..329]	[1..329]
gi\|49330200, gi\|... - gi\|49478644\|ref\|YP_038512.1\| delta-aminolevulinic acid dehydratase [Bacillus thuringiensis serovar k...	0.0	[1..329]	[1..329]
gi\|228701572, gi... - gi\|229081727\|ref\|ZP_04214220.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus Rock4-2], gi\|... gi\|229071971, gi... - gi\|229071971\|ref\|ZP_04205181.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus F65185], gi\|2... gi\|228723166, gi... - gi\|229048179\|ref\|ZP_04193748.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus AH676], gi\|22... gi\|206969953, gi... - gi\|206969953\|ref\|ZP_03230907.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus AH1134], gi\|2... gi\|228960738, gi... - gi\|228960738\|ref\|ZP_04122377.1\| Delta-aminolevulinic acid dehydratase [Bacillus thuringiensis serova... gi\|229192673, gi... - gi\|229192673\|ref\|ZP_04319632.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus ATCC 10876], ... gi\|228602716, gi... - gi\|229180738\|ref\|ZP_04308076.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus 172560W], gi\|... gi\|29898108, gi\|... - gi\|30022550\|ref\|NP_834181.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus ATCC 14579], gi\|... gi\|229152664, gi... - gi\|229152664\|ref\|ZP_04280852.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus m1550], gi\|22... gi\|229129754, gi... - gi\|229129754\|ref\|ZP_04258721.1\| Delta-aminolevulinic acid dehydratase [Bacillus cereus BDRD-Cer4], g... gi\|228804943, gi... - gi\|228954745\|ref\|ZP_04116767.1\| Delta-aminolevulinic acid dehydratase [Bacillus thuringiensis serova...	0.0	[1..329]	[1..329]
gi\|75759961, gi\|... - gi\|75759961\|ref\|ZP_00740030.1\| Delta-aminolevulinic acid dehydratase [Bacillus thuringiensis serovar... gi\|218899630, gi... - gi\|218899630\|ref\|YP_002448041.1\| delta-aminolevulinic acid dehydratase [Bacillus cereus G9842], gi\|2... gi\|228902991, gi... - gi\|228902991\|ref\|ZP_04067131.1\| Delta-aminolevulinic acid dehydratase [Bacillus thuringiensis IBL 42... gi\|228792144, gi... - gi\|228967565\|ref\|ZP_04128591.1\| Delta-aminolevulinic acid dehydratase [Bacillus thuringiensis serova...	0.0	[1..329]	[1..329]
gi\|83573008, gi\|... - gi\|83590094\|ref\|YP_430103.1\| delta-aminolevulinic acid dehydratase [Moorella thermoacetica ATCC 3907...	0.0	[1..324]	[1..324]
gi\|22777750, gi\|... - gi\|23099521\|ref\|NP_692987.1\| delta-aminolevulinic acid dehydratase [Oceanobacillus iheyensis HTE831]...	0.0	[4..327]	[5..328]
gi\|78045155, gi\|... - gi\|78045155\|ref\|YP_360053.1\| delta-aminolevulinic acid dehydratase [Carboxydothermus hydrogenoforman...	0.0	[8..325]	[6..323]

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Predicted Domain #1

Region A:
Residues: [1-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLQFNRHR RLRQSGGMRA LVRETFLHTE DFIYPIFVLE GENVRNEVPS MPGVYQMSLD  60
   61 LLQAEMQEVV DLGIRSVIVF GLPAEKDEVG SSAYCDHGIV QRAIQQIKGE FPDLVVVADT 120
  121 CLCQFTSHGH CGVIEDGIIL NDESLAVLAK TAVSQAKAGA DIIAPSNMMD GFVTAIRHAL 180
  181 DENGFGHVPV MSYAVKYSSA FYGPFRDAAH GAPQFGDRKT YQMDPANRME AFREAESDVM 240
  241 EGADFLIVKP ALSYLDIVRD VKNNFNLPVV AYNVSGEYSM IKAAAQNGWI NEKEVVLEKL 300
  301 ISMKRAGADL IITYHAKDAA RWLQEGGAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	153.0
Match:	1w5oA
Description:	Stepwise introduction of zinc binding site into porphobilinogen synthase of Pseudomonas aeruginosa (mutantions A129C, D131C and D139C)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits