YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264504, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264504, gi|....

Description	E-value	Query Range	Subject Range
gi\|110647721, gi... - gi\|110834610\|ref\|YP_693469.1\| P-protein, chorismate mutase/prephenate dehydratase [Alcanivorax borku...	3.0E-97	[2..283]	[90..360]
gi\|67158242, gi\|... - gi\|67158242\|ref\|ZP_00419292.1\| Chorismate mutase, gamma, beta and epsilon proteobacteria [Azotobacte... gi\|226943700, gi... - gi\|67158242\|ref\|ZP_00419292.1\| Chorismate mutase, gamma, beta and epsilon proteobacteria [Azotobacte...	4.0E-96	[2..283]	[95..365]
gi\|116754247, gi... - gi\|88951020\|ref\|ZP_01153594.1\| Prephenate dehydratase [Methanosaeta thermophila PT], gi\|88930219\|gb\|...	9.0E-96	[2..280]	[1..266]
gi\|49086200 - gi\|49086200\|gb\|AAT51335.1\| PA3166 [synthetic construct]	1.0E-95	[2..283]	[95..365]
gi\|254241854, gi... - gi\|84326074\|ref\|ZP_00974104.1\| COG0077: Prephenate dehydratase [Pseudomonas aeruginosa 2192], gi\|254... gi\|126168059, gi... - gi\|84319993\|ref\|ZP_00968379.1\| COG0077: Prephenate dehydratase [Pseudomonas aeruginosa C3719], gi\|25... PHEA_PSEAE - P-protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pheA PE... gi\|107102696 - gi\|107102696\|ref\|ZP_01366614.1\| hypothetical protein PaerPA_01003762 [Pseudomonas aeruginosa PACS2] PHEA_PSEAE - P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 SV=1 gi\|116051155, gi... - gi\|46164072\|ref\|ZP_00204964.1\| COG0077: Prephenate dehydratase [Pseudomonas aeruginosa UCBPP-PA14], ...	1.0E-95	[2..283]	[95..365]
gi\|94413562, gi\|... - gi\|94413562\|ref\|ZP_01293442.1\| hypothetical protein PaerP_01004657 [Pseudomonas aeruginosa PA7], gi\|...	1.0E-95	[2..283]	[95..365]
gi\|70731662, gi\|... - gi\|70731662\|ref\|YP_261404.1\| chorismate mutase/prephenate dehydrogenase [Pseudomonas fluorescens Pf-...	1.0E-95	[2..283]	[94..364]
gi\|37525232, gi\|... - gi\|37525232\|ref\|NP_928576.1\| bifunctional chorismate mutase/prephenate dehydratase [Photorhabdus lum...	2.0E-95	[3..280]	[104..376]
gi\|48730481, gi\|... - gi\|77460297\|ref\|YP_349804.1\| prephenate dehydratase [Pseudomonas fluorescens Pf0-1], gi\|77384300\|gb\|...	2.0E-95	[2..283]	[94..364]
gi\|88800760, gi\|... - gi\|88800760\|ref\|ZP_01116318.1\| Chorismate mutase [Reinekea sp. MED297], gi\|88776536\|gb\|EAR07753.1\| C...	2.0E-95	[2..283]	[102..372]

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Predicted Domain #1

Region A:
Residues: [1-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRVGYLGPE ATFTNMAVSR FFPEAEHVPY RTIPDCMDAA ANGNVDYAVV PLENAIEGSV  60
   61 NITVDYLVHE QPLSIVGEIT VPIQQHLLVH PQYADVWEEV YAVHSHPHAI AQCHKFLNEE 120
  121 LKGVTARDMT STSAAAQYVK EHPEEKIAAI ANEAAAEKYG LTIVRRGIHT HKNNHTRFLV 180
  181 LHKKKKAILP NNGENRGEKT TLMITLPADY AGALYQVLSA FAWRKLNLSK IESRPMKTGL 240
  241 GNYFFLIDVD KAYDEVLLPG VTMELEALGF SVTVLGSYSS YWL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	85.522879
Match:	2qmxA
Description:	No description for 2qmxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits