YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259156, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	368 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259156, gi|....

Description	E-value	Query Range	Subject Range
NADA_BACHK - Quinolinate synthase A OS=Bacillus thuringiensis subsp. konkukian GN=nadA PE=3 SV=1 NADA_BACC0 - Quinolinate synthase A OS=Bacillus cereus (strain AH820) GN=nadA PE=3 SV=1 gi\|196039388, gi... - gi\|196039388\|ref\|ZP_03106694.1\| quinolinate synthetase complex, subunit A [Bacillus cereus NVH0597-9... NADA_BACC7 - Quinolinate synthase A OS=Bacillus cereus (strain AH187) GN=nadA PE=3 SV=1 NADA_BACHK - Quinolinate synthase A OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=nadA PE=3 SV=1 gi\|229141166, gi... - gi\|229141166\|ref\|ZP_04269705.1\| Quinolinate synthetase A [Bacillus cereus BDRD-ST26], gi\|228642207\|g... gi\|47556649, gi\|... - gi\|47566619\|ref\|ZP_00237441.1\| quinolinate synthetase complex, A subunit [Bacillus cereus G9241], gi... gi\|228935747, gi... - gi\|228935747\|ref\|ZP_04098560.1\| Quinolinate synthetase A [Bacillus thuringiensis serovar andalousien...	0.0	[1..368]	[1..368]
NADA_BACCZ - Quinolinate synthase A OS=Bacillus cereus (strain ZK / E33L) GN=nadA PE=3 SV=1	0.0	[1..368]	[1..368]
NADA_BACCR - Quinolinate synthase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIM... gi\|228653824, gi... - gi\|229129707\|ref\|ZP_04258675.1\| Quinolinate synthetase A [Bacillus cereus BDRD-Cer4], gi\|228653824\|g...	0.0	[1..368]	[1..368]
NADA_BACCN - Quinolinate synthase A OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)...	0.0	[1..368]	[1..368]
gi\|74489519, gi\|... - gi\|75762992\|ref\|ZP_00742787.1\| Quinolinate synthetase A [Bacillus thuringiensis serovar israelensis ... gi\|228902956, gi... - gi\|228902956\|ref\|ZP_04067096.1\| Quinolinate synthetase A [Bacillus thuringiensis IBL 4222], gi\|22885...	0.0	[1..368]	[1..368]
NADA_BACC1 - Quinolinate synthase A OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=nadA PE=3 SV=1	0.0	[1..368]	[1..368]
gi\|23465936, gi\|... - gi\|23465936\|ref\|NP_696539.1\| quinolinate synthetase [Bifidobacterium longum NCC2705], gi\|23326646\|gb... gi\|189427539, gi... - gi\|23335396\|ref\|ZP_00120632.1\| COG0379: Quinolinate synthase [Bifidobacterium longum DJO10A], gi\|189...	0.0	[4..367]	[51..424]
NADA_BACWK - Quinolinate synthase A OS=Bacillus weihenstephanensis (strain KBAB4) GN=nadA PE=3 SV=1	0.0	[1..368]	[1..368]
NADA_BACHD - Quinolinate synthase A OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 915... NADA_BACHD - Quinolinate synthase A OS=Bacillus halodurans GN=nadA PE=3 SV=1	0.0	[1..367]	[1..366]
NADA_BACSU - Quinolinate synthase A OS=Bacillus subtilis (strain 168) GN=nadA PE=3 SV=2 gi\|221324250 - gi\|221324250\|ref\|ZP_03605544.1\| quinolinate synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221319969 - gi\|221319969\|ref\|ZP_03601263.1\| quinolinate synthetase [Bacillus subtilis subsp. subtilis str. JH642... gi\|221315049 - gi\|221315049\|ref\|ZP_03596854.1\| quinolinate synthetase [Bacillus subtilis subsp. subtilis str. NCIB ... NADA_BACSU - Quinolinate synthase A OS=Bacillus subtilis GN=nadA PE=3 SV=2 gi\|157850191, gi... - gi\|157850191\|gb\|ABV89929.1\| quinolinate synthetase [Bacillus subtilis subsp. subtilis], gi\|157850185...	0.0	[1..367]	[1..367]

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Predicted Domain #1

Region A:
Residues: [1-368]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILEKVQPI ETMLPERYYT MSTEDMEKRV REIKEKMGET LFIPGHHYQK DEVVQFSDAA  60
   61 GDSLQLAQVA ASNKEAKYIV FCGVHFMAET ADMLTTDEQV VILPDMRAGC SMADMADIEQ 120
  121 TERAWEELTK LFGDTMIPLT YVNSTAAIKA FCGRNGGATV TSSNAKQMVS WAFTQKERLV 180
  181 FLPDQHLGRN TAYDLGIPLD KMAVWDPHTD SLEYDGDIEE IQVILWKGHC SVHQNFTVKN 240
  241 IENVRKNHPD MNIIVHPECC YEVVAASDYA GSTKYIIDMI ESAPSGSKWA IGTEMNLVNR 300
  301 IIQQHPDKEI VSLNPFMCPC LTMNRIDLPH LLWALETIER GEEINVISVD KQVTEEAVLA 360
  361 LNRMLERV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	106.0
Match:	1wzuA
Description:	Crystal structure of quinolinate synthase (nadA)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
quinolinate synthetase A activity	13.6613396373416	bayes_pls_golite062009
catalytic activity	1.94308403509017	bayes_pls_golite062009
binding	0.5033130924527	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: