YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264472, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	591 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264472, gi|....

Description	E-value	Query Range	Subject Range
SYDND_BACC1 - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=aspS PE=3 SV=1	0.0	[1..591]	[1..591]
gi\|229158018, gi... - gi\|229158018\|ref\|ZP_04286089.1\| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342], gi\|228625471\|g... gi\|47566591, gi\|... - gi\|47566591\|ref\|ZP_00237413.1\| aspartyl-tRNA synthetase [Bacillus cereus G9241], gi\|47556621\|gb\|EAL1... SYDND_BACC2 - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain G9842) GN=aspS PE=3 SV=1 gi\|228792193, gi... - gi\|228967478\|ref\|ZP_04128506.1\| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. ... gi\|228902930, gi... - gi\|228902930\|ref\|ZP_04067071.1\| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222], gi\|22885...	0.0	[1..591]	[1..591]
SYDND_BACCZ - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain ZK / E33L) GN=aspS PE=3 SV=1	0.0	[1..591]	[1..591]
SYDND_BACAH - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=aspS PE=3 SV=1 gi\|228948116, gi... - gi\|228948116\|ref\|ZP_04110400.1\| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey B... SYDND_BACC0 - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain AH820) GN=aspS PE=3 SV=1 gi\|228659245, gi... - gi\|229123943\|ref\|ZP_04253135.1\| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201], gi\|228659245\|gb\|... SYDND_BACHK - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=aspS PE... SYDND_BACC3 - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain 03BB102) GN=aspS PE=3 SV=1 gi\|196024405, gi... - gi\|196044917\|ref\|ZP_03112151.1\| aspartyl-tRNA synthetase [Bacillus cereus 03BB108], gi\|196024405\|gb\|... gi\|229186642, gi... - gi\|229186642\|ref\|ZP_04313803.1\| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1], gi\|228596901\|gb... gi\|196034397, gi... - gi\|196034397\|ref\|ZP_03101806.1\| aspartyl-tRNA synthetase [Bacillus cereus W], gi\|195992939\|gb\|EDX568... SYD_BACHK - Aspartyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=aspS PE=3 SV=1	0.0	[1..591]	[1..591]
SYDND_BACCN - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NV...	0.0	[1..589]	[1..589]
SYDND_BACCR - Aspartate--tRNA(Asp/Asn) ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 153...	0.0	[1..591]	[1..591]
SYD_STAHJ - Aspartate--tRNA ligase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=aspS PE=3 SV=1	0.0	[1..586]	[1..587]
SYDND_DESRM - Aspartate--tRNA(Asp/Asn) ligase OS=Desulfotomaculum reducens (strain MI-1) GN=aspS PE=3 SV=1	0.0	[3..591]	[10..598]
SYD_BACLD - Aspartate--tRNA ligase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200...	0.0	[1..588]	[1..589]
gi\|75764435, gi\|... - gi\|75764435\|ref\|ZP_00743935.1\| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ...	0.0	[1..580]	[1..580]

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Predicted Domain #1

Region A:
Residues: [1-591]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERTHACGK VTVEAVGQTV QLKGWVQKRR DLGGLIFIDL RDRTGIVQVV FNPETSKEAL  60
   61 EVAETIRSEY VLHVEGTVVE RGEGAINDNM ATGRIEVQAT KVSVLNAAKT TPIIIADDTD 120
  121 ASEDVRLKYR YLDLRRPVMF NTFKMRHDVT KTIRNFLDTE EFLEVETPIL TKSTPEGARD 180
  181 YLVPSRVHDG EFYALPQSPQ LFKQLLMVGG FERYYQVARC FRDEDLRADR QPEFTQIDIE 240
  241 ASFLTQDEIL DMMERMMTKV MKDAKGVEVS APFPRMKYAD AMARYGSDKP DTRFEMELTD 300
  301 LSEFAAGCGF KVFTSAVESG GQVKAINAKG AASKYSRKDI DALTEFVKVY GAKGLAWLKV 360
  361 EEDGLKGPIA KFFGEEDASV LMNTLEATAG DLLLFVADKK SVVADSLGAL RLRLGKELEL 420
  421 IDESKFNFLW VTDWPLLEYD EDADRYFAAH HPFTMPFRED VELLETAPEK ARAQAYDLVL 480
  481 NGYELGGGSL RIYERDVQEK MFKALGFSQE EAQEQFGFLL EAFEYGTPPH GGIALGLDRL 540
  541 VMLLAGRTNL RDTIAFPKTA SASCLLTEAP SPVAEAQLEE LNLKLNVKEE K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	177.0
Match:	1eqrA
Description:	Aspartyl-tRNA synthetase (AspRS); Prokaryotic AspRS, insert domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits