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View Structure Prediction Details

Protein: gi|49181146, gi|...
Organism: Bacillus anthracis str. Sterne
Length: 772 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49181146, gi|....

Description E-value Query
Range
Subject
Range
gi|42783452, gi|... - gi|42783452|ref|NP_980699.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus cer...
0.0 [1..772] [1..773]
gi|29897961, gi|... - gi|30022403|ref|NP_834034.1| ComE operon protein 3 [Bacillus cereus ATCC 14579], gi|29897961|gb|AAP1...
0.0 [1..772] [1..773]
gi|47569321, gi|... - gi|47569321|ref|ZP_00240005.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus c...
0.0 [1..772] [1..773]
gi|51974648, gi|... - gi|52141179|ref|YP_085650.1| DNA internalization-related competence protein [Bacillus cereus E33L], ...
0.0 [1..772] [1..773]
gi|254721916 - gi|254721916|ref|ZP_05183705.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus ...
gi|49332923, gi|... - gi|49481367|ref|YP_038379.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus thu...
0.0 [1..772] [1..773]
gi|74489121, gi|... - gi|75763392|ref|ZP_00743125.1| COME operon protein 3 [Bacillus thuringiensis serovar israelensis ATC...
0.0 [27..772] [2..748]
gi|89206293, gi|... - gi|89206293|ref|ZP_01184853.1| ComEC/Rec2-related protein:DNA internalization-related competence pro...
0.0 [1..772] [1..773]
gi|89203489, gi|... - gi|89203489|ref|ZP_01182147.1| ComEC/Rec2-related protein:DNA internalization-related competence pro...
0.0 [1..772] [1..774]
gi|227007070, gi... - gi|227817101|ref|YP_002817110.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus...
gi|65321697 - gi|65321697|ref|ZP_00394656.1| COG0658: Predicted membrane metal-binding protein [Bacillus anthracis...
0.0 [51..772] [1..722]
gi|37650596|emb|... - ComEC protein [Bacillus megaterium]
gi|37650596 - gi|37650596|emb|CAD69020.1| ComEC protein [Bacillus megaterium]
0.0 [1..760] [1..758]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQWGYVAI SFIIGIAIAF SSSVVLLTCC LGLYVFFCLY RTSRKTFLYC MIVCFSGAMY  60
   61 TTYVQGQNKP LGESYEATRG VIYNTPLING DRLSFQVEDQ NKNIVQLSYK MKSASEKKQM 120
  121 RQLHAGVSCI FDGERKEPQI ARNFHGFNYR DYLYKQNIHF ILEA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYISECRKTS LSLVQWILLL RQQAILGVTE MFPEQSGAFM NALLFGDRQQ MTFEVEGQYQ  60
   61 QFGLVHLLAI SGSHIVLLMV IVYFILLRSG VTREIATVCL IFFIPIYMIL AGASPSVIRA 120
  121 SITGVLMLIA FMCSIRLSSL DALSITAICM LIFDPYLVFN IGFQFSFVGS FALLLSAPLL 180
  181 LESGNGVIRN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [355-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIYISLISQL VSTPILLYHF GYYSPYSIFL NILYVPFLSL IVLPCSIIIL ICLPIIPFLA  60
   61 KSFANVLSIG LNLSNDFLSY CESLPFTRLN FGQTPILLVA LYCVSIISVL MVWERRISKG 120
  121 MVFIFAGIFL FISTGHYVYP YFRESGSVT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [504-772]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLDVGQGDAI LIRLPYDQEI YLIDTGGTIR LNKEEWQRKK HEFSVGNDVL IPYLQKEGIK  60
   61 KIDKLIVTHG DADHIGAAQE LLSNITVKEV VFGRKEQEAI LEKAVKKQAL EKEVKISEVG 120
  121 EGESWRVNEA EFFVLAPTGK ERSENNASIV LWAKLGGITW LFTGDLEEGE KGLVATYPDL 180
  181 RADVLKVAHH GSNTSSITPF LSAVQPNIAI ISVGERNRYG HPHKEGIERF EKMAIEIWRT 240
  241 DKQGAISYVF KEERGTFRSK ITYDETRNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.39794
Match: 1xm8A
Description: X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.590913389028346 bayes_pls_golite062009
catalytic activity 0.398796871066338 bayes_pls_golite062009
protein binding 0.233736652147815 bayes_pls_golite062009
RNA binding 0.165539790635644 bayes_pls_golite062009
hydrolase activity 0.0778913972787759 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle