YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258982, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	192 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258982, gi|....

Description	E-value	Query Range	Subject Range
gi\|221314736 - gi\|221314736\|ref\|ZP_03596541.1\| hypothetical protein BsubsN3_13547 [Bacillus subtilis subsp. subtili... gi\|221319659 - gi\|221319659\|ref\|ZP_03600953.1\| hypothetical protein BsubsJ_13468 [Bacillus subtilis subsp. subtilis... gi\|221323936 - gi\|221323936\|ref\|ZP_03605230.1\| hypothetical protein BsubsS_13602 [Bacillus subtilis subsp. subtilis... YQGN_BACSU - Uncharacterized protein yqgN OS=Bacillus subtilis GN=yqgN PE=1 SV=1 YQGN_BACSU - Uncharacterized protein YqgN OS=Bacillus subtilis (strain 168) GN=yqgN PE=1 SV=1	3.0E-56	[5..188]	[2..185]
gi\|126510113, gi... - gi\|153819332\|ref\|ZP_01971999.1\| conserved hypothetical protein [Vibrio cholerae NCTC 8457], gi\|12651... gi\|153822866, gi... - gi\|229512342\|ref\|ZP_04401821.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae B33], gi\|2293... gi\|75829168, gi\|... - gi\|75829168\|ref\|ZP_00758481.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae MO10]... gi\|227082599, gi... - gi\|227082599\|ref\|YP_002811150.1\| hypothetical protein VCM66_2401 [Vibrio cholerae M66-2], gi\|2270104... gi\|229507463, gi... - gi\|229507463\|ref\|ZP_04396968.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae BX 330286], g... gi\|229519478, gi... - gi\|229519478\|ref\|ZP_04408921.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae RC9], gi\|2293... gi\|229369623, gi... - gi\|229606968\|ref\|YP_002877616.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae MJ-1236], gi... gi\|11278428 - pir\|\|A82072 conserved hypothetical protein VC2479 [imported] - Vibrio cholerae (strain N16961 serogr... gi\|121547403, gi... - gi\|121590762\|ref\|ZP_01678092.1\| conserved hypothetical protein [Vibrio cholerae 2740-80], gi\|1215474... gi\|9657058, gi\|1... - gi\|9657058\|gb\|AAF95621.1\| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N169... gi\|124118870, gi... - gi\|153222433\|ref\|ZP_01953167.1\| conserved hypothetical protein [Vibrio cholerae MAK 757], gi\|1241188...	2.0E-54	[1..185]	[1..191]
gi\|254226257, gi... - gi\|75817952\|ref\|ZP_00748198.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae V51],...	2.0E-54	[1..185]	[1..191]
gi\|121628693, gi... - gi\|75814146\|ref\|ZP_00744780.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae V52],... gi\|146317596, gi... - gi\|75827741\|ref\|ZP_00757176.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Vibrio cholerae O395]...	2.0E-54	[1..185]	[1..191]
gi\|71280724, gi\|... - gi\|71280724\|ref\|YP_270316.1\| 5-formyltetrahydrofolate cyclo-ligase family protein [Colwellia psychre...	3.0E-54	[3..188]	[2..191]
gi\|27364918, gi\|... - gi\|27364918\|ref\|NP_760446.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio vulnificus CMCP6], gi\|273... gi\|37681033, gi\|... - gi\|37681033\|ref\|NP_935642.1\| 5-formyltetrahydrofolate cyclo-ligase [Vibrio vulnificus YJ016], gi\|371...	3.0E-54	[4..185]	[5..192]
gi\|254230209, gi... - gi\|75853743\|ref\|ZP_00761514.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Vibrio sp. Ex25], gi\|...	5.0E-54	[4..185]	[5..192]
gi\|25302305 - pir\|\|A83827 5-formyltetrahydrofolate cyclo-ligase BH1417 [imported] - Bacillus halodurans (strain C-... gi\|10174034, gi\|... - gi\|15613980\|ref\|NP_242283.1\| 5-formyltetrahydrofolate cyclo-ligase [Bacillus halodurans C-125], gi\|1...	5.0E-54	[3..186]	[2..185]
gi\|192930785, gi... - gi\|193063508\|ref\|ZP_03044597.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli E22], gi\|... gi\|208725708, gi... - gi\|208805907\|ref\|ZP_03248244.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|189403793, gi... - gi\|189403793\|ref\|ZP_02785050.2\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|38704126 - gi\|38704126\|ref\|NP_311809.2\| putative ligase [Escherichia coli O157:H7] gi\|189404764, gi... - gi\|189404764\|ref\|ZP_02810768.2\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|209160736, gi... - gi\|209399336\|ref\|YP_002272387.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 ... gi\|217319900, gi... - gi\|217327533\|ref\|ZP_03443616.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|208735489, gi... - gi\|208814212\|ref\|ZP_03255541.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|208819943, gi... - gi\|208819943\|ref\|ZP_03260263.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|170018843, gi... - gi\|170018843\|ref\|YP_001723797.1\| putative ligase [Escherichia coli ATCC 8739], gi\|169753771\|gb\|ACA76... gi\|194424183, gi... - gi\|83587693\|ref\|ZP_00926320.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Escherichia coli 101-... gi\|189401951, gi... - gi\|189401951\|ref\|ZP_02778860.2\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|194415490, gi... - gi\|75212474\|ref\|ZP_00712498.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Escherichia coli B171... gi\|189402865, gi... - gi\|189402865\|ref\|ZP_02791915.2\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|75228579, gi\|... - gi\|75228579\|ref\|ZP_00715208.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Escherichia coli B7A]... gi\|188024584, gi... - gi\|188024584\|ref\|ZP_02772628.2\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|192959432, gi... - gi\|75239520\|ref\|ZP_00723491.1\| COG0212: 5-formyltetrahydrofolate cyclo-ligase [Escherichia coli E110... gi\|189010397, gi... - gi\|189010397\|ref\|ZP_03006309.1\| 5,10-methenyltetrahydrofolate synthetase [Escherichia coli O157:H7 s... gi\|38704126 - gi\|38704126\|ref\|NP_311809.2\| putative ligase [Escherichia coli O157:H7 str. Sakai] gi\|33347709\|ref\|... - putative ligase [Escherichia coli K12], putative ligase [Escherichia coli K12], 5-formyltetrahydrofo...	5.0E-54	[1..185]	[9..197]
gi\|60594282, gi\|... - gi\|60594284\|pdb\|1YDM\|C Chain C, X-Ray Structure Of Northeast Structural Genomics Target Sr44, gi\|605...	7.0E-54	[5..188]	[2..185]

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Predicted Domain #1

Region A:
Residues: [1-192]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREEKLRLRK QIIEHMNSLS KERYTTLSEQ IVFSLYEQKE WAEAKTIGIT LSMENEVNTY  60
   61 PIIEKAWKEG KRVVVPKCNK ETRTMSFRQI SNFDQLETVY MNLREPIPAL TEEVNADEID 120
  121 LQIVPGVAYT ERGERIGYGG GYYDRYLVHY KGKTLSLAYS FQMVEHIPVE PFDKNVEKII 180
  181 TEKGTMVKNG LV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.221849
Match:	2jcbA
Description:	No description for 2jcbA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits