YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258958, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	99 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258958, gi|....

Description	E-value	Query Range	Subject Range
FMD1_NEIGO - Fimbrial protein MS11-D1 OS=Neisseria gonorrhoeae GN=pilE1 PE=3 SV=1	2.0E-23	[4..98]	[5..99]
gi\|2073462 - gi\|2073462\|emb\|CAA73472.1\| pilE [Neisseria meningitidis]	5.0E-23	[4..97]	[5..98]
FMM1_NEIMA - Fimbrial protein OS=Neisseria meningitidis serogroup A GN=pilE PE=1 SV=1 gi\|11277673 - gi\|11277673\|pir\|\|D82021 fimbrial protein precursor (pilin) NMA0264 [imported] - Neisseria meningitid... FMM1_NEIMA - Fimbrial protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=pilE PE=1 SV=...	3.0E-22	[4..97]	[5..98]
gi\|74017632, gi\|... - gi\|74017632\|ref\|ZP_00688255.1\| General secretion pathway protein G [Burkholderia ambifaria AMMD], gi... gi\|171991641, gi... - gi\|172059124\|ref\|YP_001806776.1\| general secretion pathway protein G [Burkholderia ambifaria MC40-6]... gi\|170699041, gi... - gi\|170699041\|ref\|ZP_02890098.1\| general secretion pathway protein G [Burkholderia ambifaria IOP40-10...	8.0E-22	[2..85]	[13..96]

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Predicted Domain #1

Region A:
Residues: [1-99]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNEEGFTLL EMLLVMVVIT VLLLLIIPDV VTQRSSVEGK GCKAYVKSIE AQVQVYQLQH  60
   61 NKIPTLKELS DEKYITADKC PNGESIHISN DGTVTSGKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	2hi2A
Description:	No description for 2hi2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits