YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264244, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	242 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264244, gi|....

Description	E-value	Query Range	Subject Range
gi\|223488779, gi... - gi\|254479407\|ref\|ZP_05092739.1\| Glycerophosphoryl diester phosphodiesterase family protein [Carboxyd... gi\|20807473 - gi\|20807473\|ref\|NP_622644.1\| Glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon... gi\|20807473, gi\|... - gi\|20807473\|ref\|NP_622644.1\| glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon...	7.0E-69	[2..240]	[3..241]
gi\|229134982, gi... - gi\|229134982\|ref\|ZP_04263788.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus cereus BDRD-ST... gi\|228747972, gi... - gi\|229013379\|ref\|ZP_04170519.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus mycoides DSM 2... gi\|163864116, gi... - gi\|89207000\|ref\|ZP_01185549.1\| Glycerophosphodiester phosphodiesterase [Bacillus weihenstephanensis ...	9.0E-68	[1..242]	[1..242]
gi\|18144079, gi\|... - gi\|18309403\|ref\|NP_561337.1\| glycerophosphodiester phosphodiesterase [Clostridium perfringens str. 1...	1.0E-67	[3..241]	[5..243]
gi\|89151188, gi\|... - gi\|89200807\|ref\|ZP_01179557.1\| Glycerophosphodiester phosphodiesterase [Bacillus cereus subsp. cytot...	2.0E-67	[1..242]	[1..242]
gi\|110800595, gi... - gi\|110800595\|ref\|YP_694881.1\| putative glycerophosphoryl diester phosphodiesterase [Clostridium perf...	2.0E-67	[3..241]	[5..243]
gi\|242257355, gi... - gi\|242257355\|ref\|ZP_04802223.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter sp. X513... gi\|241904084, gi... - gi\|241904084\|ref\|ZP_04788795.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter brockii ... gi\|114844053, gi... - gi\|167040045\|ref\|YP_001663030.1\| glycerophosphodiester phosphodiesterase [Thermoanaerobacter sp. X51... gi\|166856211, gi... - gi\|76797455\|ref\|ZP_00779769.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter ethanolic...	3.0E-67	[2..240]	[3..241]
gi\|42739215, gi\|... - gi\|42783287\|ref\|NP_980534.1\| glycerophosphoryl diester phosphodiesterase family protein [Bacillus ce...	1.0E-66	[1..242]	[1..242]
gi\|110801784, gi... - gi\|110801784\|ref\|YP_697749.1\| glycerophosphoryl diester phosphodiesterase [Clostridium perfringens S...	1.0E-66	[3..241]	[5..243]
gi\|47569686, gi\|... - gi\|47569686\|ref\|ZP_00240361.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus cereu...	5.0E-66	[1..242]	[1..242]
gi\|49330123, gi\|... - gi\|49478567\|ref\|YP_038231.1\| glycerophosphoryl diester phosphodiesterase, glycerophosphodiester phos...	7.0E-66	[1..242]	[1..242]

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Predicted Domain #1

Region A:
Residues: [1-242]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLIFAHRGA AGTYPENTMI SFEAAESFKA DGIELDVQLT KDGKVVVIHD ETVNRTTNGK  60
   61 GAVRNYVYED LCKLDASYKF GDKVGFCKIP LLEEVLKWIE KTELLLNIEL KNNKIPYRGL 120
  121 EEEVITLVRK FNLEDRVIFS SFNHYSMKRC HMMAPDIQTA ILYREGLHSP WAYAKKMGAT 180
  181 AVHPNYRYLQ DAIAELTMES DVEVRPYTIN EETLMRKYFD MNISAIITDY PEMARTLLSI 240
  241 KK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.221849
Match:	2otdA
Description:	No description for 2otdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits