YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258841, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	242 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258841, gi|....

Description	E-value	Query Range	Subject Range
gi\|68194822, gi\|... - gi\|69247497\|ref\|ZP_00604367.1\| Cobyrinic acid a,c-diamide synthase [Enterococcus faecium DO], gi\|681... gi\|48824601 - ref\|ZP_00285954.1\| COG1192: ATPases involved in chromosome partitioning [Enterococcus faecium]	5.0E-36	[2..241]	[3..253]
gi\|163864058, gi... - gi\|89207345\|ref\|ZP_01185888.1\| Dethiobiotin synthase [Bacillus weihenstephanensis KBAB4], gi\|8915470...	2.0E-35	[1..241]	[1..241]
gi\|39577437, gi\|... - gi\|42525226\|ref\|NP_970606.1\| partition protein, ParA-like protein [Bdellovibrio bacteriovorus HD100]...	8.0E-35	[2..238]	[19..271]
gi\|196251628, gi... - gi\|196251628\|ref\|ZP_03150296.1\| Cobyrinic acid ac-diamide synthase [Clostridium thermocellum DSM 415... gi\|125974862, gi... - gi\|67874869\|ref\|ZP_00504449.1\| ATPase, ParA type [Clostridium thermocellum ATCC 27405], gi\|67850972\|...	1.0E-34	[2..238]	[3..254]
gi\|126097266, gi... - gi\|126208474\|ref\|YP_001053699.1\| putative ATPase [Actinobacillus pleuropneumoniae L20], gi\|126097266... gi\|32033984 - gi\|32033984\|ref\|ZP_00134240.1\| COG0489: ATPases involved in chromosome partitioning [Actinobacillus ...	1.0E-34	[3..239]	[104..351]
gi\|78171808, gi\|... - gi\|78189609\|ref\|YP_379947.1\| ATP-binding Mrp/Nbp35 family protein [Chlorobium chlorochromatii CaD3],...	1.0E-34	[4..237]	[52..290]
gi\|227518145, gi... - gi\|227518145\|ref\|ZP_03948194.1\| chromosome partitioning ATPase [Enterococcus faecalis TX0104], gi\|22... gi\|29345208, gi\|... - gi\|29377740\|ref\|NP_816894.1\| ParaA family ATPase [Enterococcus faecalis V583], gi\|29345208\|gb\|AAO829... gi\|238830948, gi... - gi\|238856387\|ref\|ZP_04646656.1\| sporulation initiation inhibitor protein soj [Enterococcus faecalis ... gi\|229304168, gi... - gi\|229550735\|ref\|ZP_04439460.1\| chromosome partitioning ATPase [Enterococcus faecalis ATCC 29200], g... gi\|229307747, gi... - gi\|229547165\|ref\|ZP_04435890.1\| chromosome partitioning ATPase [Enterococcus faecalis TX1332], gi\|22... gi\|227175226, gi... - gi\|227555649\|ref\|ZP_03985696.1\| chromosome partitioning ATPase [Enterococcus faecalis HH22], gi\|2271...	1.0E-34	[2..237]	[3..249]
gi\|58001938, gi\|... - gi\|58039524\|ref\|YP_191488.1\| chromosome partitioning protein ParA [Gluconobacter oxydans 621H], gi\|5...	2.0E-34	[2..232]	[11..260]
gi\|76588899, gi\|... - gi\|76795585\|ref\|ZP_00777957.1\| Cobyrinic acid a,c-diamide synthase [Thermoanaerobacter ethanolicus A... gi\|241903130, gi... - gi\|241903130\|ref\|ZP_04787858.1\| Cobyrinic acid ac-diamide synthase [Thermoanaerobacter brockii subsp...	2.0E-34	[2..239]	[3..252]
gi\|56422025, gi\|... - gi\|56422025\|ref\|YP_149343.1\| sporulation initiation inhibitor protein [Geobacillus kaustophilus HTA4... gi\|229497925, gi... - gi\|229497925\|ref\|ZP_04391624.1\| Cobyrinic acid ac-diamide synthase [Geobacillus sp. Y412MC52], gi\|22... gi\|221086934, gi... - gi\|221086934\|ref\|ZP_03556474.1\| Cobyrinic acid ac-diamide synthase [Geobacillus sp. Y412MC61], gi\|22...	3.0E-34	[2..235]	[3..251]

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Predicted Domain #1

Region A:
Residues: [1-242]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFFITATD TEVGKTVVAG ALAGVFRELG YNIGVYKALQ SGHVASNPEG DAARLKVLSG  60
   61 VPIKEDEICP YSIEEPLAPR LAMKRAGRAV TLKDIIHHYN ERLKEFNSLF VEGAGGLAVP 120
  121 YTEDALVIDF AKELQLPLIV VARPTLGTVN HTVLTIAYAK AHGLTVAGVI LSGCKECEME 180
  181 RVQENKVMIE ELSGVPVLGL LPFFEGEFTK EEVLESAKEY IMISKLEEFI RNESTVAHTS 240
  241 SN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.30103
Match:	1a82A
Description:	DETHIOBIOTIN SYNTHETASE FROM ESCHERICHIA COLI, COMPLEX WITH SUBSTRATES ATP AND DIAMINOPELARGONIC ACID
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.37148167194523	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: