YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258840, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	395 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258840, gi|....

Description	E-value	Query Range	Subject Range
gi\|74493251, gi\|... - gi\|75759245\|ref\|ZP_00739345.1\| 8-amino-7-oxononanoate synthase [Bacillus thuringiensis serovar israe... BIOF_BACC2 - Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain G9842) GN=bioF PE=3 SV=1	4.0E-79	[1..395]	[1..395]
gi\|85695191, gi\|... - gi\|85710787\|ref\|ZP_01041848.1\| 2-amino-3-ketobutyrate coenzyme A ligase [Idiomarina baltica OS145], ...	9.0E-79	[1..393]	[1..395]
gi\|47568178, gi\|... - gi\|47568178\|ref\|ZP_00238882.1\| 8-amino-7-oxononanoate synthase [Bacillus cereus G9241], gi\|47555168\|...	2.0E-78	[1..395]	[1..395]
BIOF_BACCR - Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 /... BIOF_BACC4 - Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain B4264) GN=bioF PE=3 SV=1	5.0E-78	[1..395]	[1..395]
BIOF_BACCZ - Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain ZK / E33L) GN=bioF PE=3 SV=1	6.0E-78	[1..395]	[1..395]
HEM0_OPSTA - 5-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Opsanus tau GN=alas2 PE=2 SV=1	9.0E-78	[2..395]	[137..542]
BIOF_BACHK - Putative 8-amino-7-oxononanoate synthase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) G... BIKB_BACHK, BIOF... - Putative 8-amino-7-oxononanoate synthase OS=Bacillus thuringiensis subsp. konkukian GN=bioF PE=3 SV=...	9.0E-78	[1..395]	[1..395]
gi\|68190942, gi\|... - gi\|69277969\|ref\|ZP_00613180.1\| 2-amino-3-ketobutyrate coenzyme A ligase [Mesorhizobium sp. BNC1], gi...	2.0E-77	[1..393]	[1..393]
gi\|94409483 - gi\|94409483\|ref\|XP_985853.1\| PREDICTED: similar to 5-aminolevulinate synthase, erythroid-specific, m...	4.0E-77	[1..393]	[465..873]
BIOF_THEPX - 8-amino-7-oxononanoate synthase OS=Thermoanaerobacter sp. (strain X514) GN=Teth514_0779 PE=3 SV=1 gi\|242258126, gi... - gi\|242258126\|ref\|ZP_04802958.1\| pyridoxal phosphate-dependent acyltransferase [Thermoanaerobacter sp...	5.0E-77	[7..393]	[8..394]

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Predicted Domain #1

Region A:
Residues: [1-395]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQPWRTHLQ TKLKQLHEQG QYRNLHVTEQ AEETWLIRDE KRMLNLASNN YLGLAGDERL  60
   61 KEAAIVCTRK YGTGATASRL VVGNYSLYEE VERSICNWKG TEKALVVNSG FTANVGAISS 120
  121 LACRHDIVFS DKLNHASIVD GIILSGAEHK RYRHNDLNHL EALLKTASPE KRKLIVTDTV 180
  181 FSMDGDTAHL RELVQLKEKY GAIIIVDEAH ASGIYGIGGA GLSHIEKDLA QKIDIHMGTF 240
  241 SKALGCYGAY LTGDAIYIEY LQNMMRSFIF TTALPPSTLG AVQKAIEIVQ EDHKRRENLI 300
  301 ANGEYFRSKL REAGFNIGNS STHIVPIVVG SNENTLRFSK RLQEAGIAAI AIRPPTVPVH 360
  361 SSRIRFAVTS QHTIADLKWA IDRITHIAKE EELFV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	71.39794
Match:	1fc4A
Description:	2-amino-3-ketobutyrate CoA ligase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits