YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258761, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	170 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258761, gi|....

Description	E-value	Query Range	Subject Range
gi\|218537919, gi... - gi\|218905176\|ref\|YP_002453010.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus... MTND_BACCZ - Acireductone dioxygenase OS=Bacillus cereus (strain ZK / E33L) GN=mtnD PE=3 SV=1 gi\|196034860, gi... - gi\|196034860\|ref\|ZP_03102267.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus ... gi\|196023394, gi... - gi\|196045954\|ref\|ZP_03113183.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus ... gi\|47557201, gi\|... - gi\|47565921\|ref\|ZP_00236960.1\| ARD/ARD' family protein [Bacillus cereus G9241], gi\|47557201\|gb\|EAL15... gi\|254721643 - gi\|254721643\|ref\|ZP_05183432.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus ... gi\|225786186, gi... - gi\|225866026\|ref\|YP_002751404.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus...	1.0E-53	[1..170]	[1..170]
gi\|218899200, gi... - gi\|218899200\|ref\|YP_002447611.1\| putative 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase [Bacillus... gi\|75760107, gi\|... - gi\|75760107\|ref\|ZP_00740169.1\| 2-hydroxy-3-oxo-5-methylthiopent-2-enoate oxidase [Bacillus thuringie...	3.0E-53	[1..170]	[1..170]
MTND_BACCR - Acireductone dioxygenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NC...	5.0E-53	[1..170]	[1..170]
MTND_BACC1 - Acireductone dioxygenase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=mtnD PE=3 SV=1	2.0E-52	[1..170]	[1..170]
gi\|77381955, gi\|... - gi\|77457952\|ref\|YP_347457.1\| acireductone dioxygenase, ARD [Pseudomonas fluorescens Pf0-1], gi\|77381...	2.0E-52	[1..170]	[21..187]
MTND_BACHK - Acireductone dioxygenase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=mtnD PE=3 SV=1 MTND_BACHK - Acireductone dioxygenase OS=Bacillus thuringiensis subsp. konkukian GN=mtnD PE=3 SV=1	4.0E-52	[1..170]	[1..170]
MTND_EXIS2 - Acireductone dioxygenase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mtn...	6.0E-51	[1..170]	[1..170]
MTND_PSEU2 - Acireductone dioxygenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=mtnD PE=3 SV=1	8.0E-51	[1..170]	[1..167]
MTND_PSESM - Acireductone dioxygenase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=mtnD PE=3 SV=1 MTND_PSESM - Acireductone dioxygenase OS=Pseudomonas syringae pv. tomato GN=mtnD PE=3 SV=1	2.0E-50	[1..170]	[1..167]
MTND_PSE14 - Acireductone dioxygenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=mtnD ...	4.0E-50	[1..170]	[1..167]

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Predicted Domain #1

Region A:
Residues: [1-170]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQIRIHEVN TRIENEVKVS KFLQEEGVLY EKWNISKLPP HLNENYSLTD ENKAEILAVF  60
   61 SKEIADVSAR RGYKAHDVIS LSNSTPNLDE LLINFQKEHH HTDDEVRFIV SGHGIFAIEG 120
  121 KDGTFFDVEL EPGDLISVPE NARHYFTLQD DRQVVAIRIF VTTEGWVPIY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.69897
Match:	1zrrA
Description:	Residual Dipolar Coupling Refinement of Acireductone Dioxygenase from Klebsiella
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits