YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264087, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	419 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264087, gi|....

Description	E-value	Query Range	Subject Range
gi\|89149710, gi\|... - gi\|89202292\|ref\|ZP_01181019.1\| extracellular solute-binding protein, family 1 [Bacillus cereus subsp...	4.0E-69	[1..419]	[1..419]
gi\|42739039, gi\|... - gi\|42783111\|ref\|NP_980358.1\| maltosaccharide ABC transporter, maltosaccharide-binding protein, putat...	7.0E-69	[1..419]	[1..419]
gi\|228772431, gi... - gi\|228987202\|ref\|ZP_04147323.1\| Maltosaccharide ABC transporter, maltosaccharide-binding protein [Ba... gi\|229198135, gi... - gi\|229198135\|ref\|ZP_04324844.1\| Maltosaccharide ABC transporter, maltosaccharide-binding protein [Ba... gi\|47557173, gi\|... - gi\|47565893\|ref\|ZP_00236932.1\| maltose ABC transporter, periplasmic maltose-binding protein [Bacillu...	1.0E-68	[1..419]	[1..419]
gi\|49330049, gi\|... - gi\|49478493\|ref\|YP_038073.1\| maltose-maltodextrin ABC-related solute binding protein [Bacillus thuri...	1.0E-68	[1..419]	[1..419]
gi\|89208841, gi\|... - gi\|89208841\|ref\|ZP_01187324.1\| extracellular solute-binding protein, family 1 [Bacillus weihenstepha...	5.0E-68	[1..419]	[1..419]
gi\|51974947, gi\|... - gi\|52141478\|ref\|YP_085351.1\| maltosaccharide ABC transporter, maltosaccharide-binding protein [Bacil...	6.0E-68	[1..419]	[1..419]
gi\|89087210, gi\|... - gi\|89098047\|ref\|ZP_01170933.1\| maltosaccharide ABC transporter, maltosaccharide-binding protein, put...	7.0E-68	[1..418]	[21..444]
gi\|25298282 - pir\|\|C83902 maltose/maltodextrin transport system (maltose/ maltodextrin-binding protein) BH2019 [im... gi\|15614582, gi\|... - gi\|15614582\|ref\|NP_242885.1\| maltose/maltodextrin transport system (maltose/maltodextrin-binding pro...	3.0E-64	[1..418]	[2..424]
gi\|56965282, gi\|... - gi\|56965282\|ref\|YP_177014.1\| sugar ABC transporter substrate-binding protein [Bacillus clausii KSM-K...	2.0E-63	[1..418]	[1..419]
gi\|50122097, gi\|... - gi\|50122097\|ref\|YP_051264.1\| maltose-binding periplasmic protein [Pectobacterium atrosepticum SCRI10...	1.0E-62	[12..414]	[5..406]

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Predicted Domain #1

Region A:
Residues: [1-419]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKALSLLTV SALSIGMLSA CGPKDSGKKE ESKAKKDYDL LVWEDDKKGV GLEPAVKSFE  60
   61 EKYKVKVKVV EMQMTDQVKK LRLDGPAGTG PDVVTLPHDQ IGNAVTEGLL SEVKADDAVK 120
  121 SKFTDSSIEA QTYNGKLYGL PKAIETPVFI YNKKLMPKAP ETMDELFNFS KEFTKDGKYG 180
  181 FLALGDNFYF ANAFMAGMGG YVFGEKDGKP NASDVGLNNS GAVQGAEYLQ KWYKEKLFPK 240
  241 GIIGESGGPA ADGLFNEGKA ASIMNGPWAF QAMEKNGIDY GVAPMPKLPN GQPLKTFVGV 300
  301 KGWHVTSFSK QNDLATKFTE WVTNEENAKI RFEKTKEIPP VKAVMEDPII KDNEAAKAVA 360
  361 TQSENGIPMP NIPEMQEVWK PAGDALQLVV TDKEAPKAAL DSAVKQIKGN IEANHSKQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.69897
Match:	2dfzA
Description:	No description for 2dfzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits