YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258663, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	1148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258663, gi|....

Description	E-value	Query Range	Subject Range
gi\|49330018, gi\|... - gi\|49478462\|ref\|YP_038009.1\| pyruvate carboxylase [Bacillus thuringiensis serovar konkukian str. 97-...	0.0	[1..1148]	[1..1148]
gi\|47557102, gi\|... - gi\|47565822\|ref\|ZP_00236861.1\| pyruvate carboxylase [Bacillus cereus G9241], gi\|47557102\|gb\|EAL15431...	0.0	[1..1148]	[1..1148]
gi\|51975010, gi\|... - gi\|52141541\|ref\|YP_085288.1\| pyruvate carboxylase [Bacillus cereus E33L], gi\|51975010\|gb\|AAU16560.1\|...	0.0	[1..1148]	[1..1148]
gi\|42783042, gi\|... - gi\|42783042\|ref\|NP_980289.1\| pyruvate carboxylase [Bacillus cereus ATCC 10987], gi\|42738969\|gb\|AAS42...	0.0	[1..1148]	[1..1148]
gi\|228654461, gi... - gi\|229129224\|ref\|ZP_04258197.1\| Pyruvate carboxylase [Bacillus cereus BDRD-Cer4], gi\|228654461\|gb\|EE... gi\|229111417, gi... - gi\|229111417\|ref\|ZP_04240969.1\| Pyruvate carboxylase [Bacillus cereus Rock1-15], gi\|228672033\|gb\|EEL... gi\|228702243, gi... - gi\|229081199\|ref\|ZP_04213709.1\| Pyruvate carboxylase [Bacillus cereus Rock4-2], gi\|228702243\|gb\|EEL5... gi\|228723709, gi... - gi\|229047633\|ref\|ZP_04193221.1\| Pyruvate carboxylase [Bacillus cereus AH676], gi\|228723709\|gb\|EEL750... gi\|30022035, gi\|... - gi\|30022035\|ref\|NP_833666.1\| pyruvate carboxylase [Bacillus cereus ATCC 14579], gi\|29897591\|gb\|AAP10... gi\|229146518, gi... - gi\|229146518\|ref\|ZP_04274889.1\| Pyruvate carboxylase [Bacillus cereus BDRD-ST24], gi\|228637151\|gb\|EE...	0.0	[1..1148]	[1..1148]
gi\|163863883, gi... - gi\|89206387\|ref\|ZP_01184946.1\| Pyruvate carboxylase [Bacillus weihenstephanensis KBAB4], gi\|89155649...	0.0	[1..1148]	[1..1148]
gi\|89202981, gi\|... - gi\|89202981\|ref\|ZP_01181683.1\| Pyruvate carboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98], g...	0.0	[1..1147]	[1..1147]
gi\|56419614, gi\|... - gi\|56419614\|ref\|YP_146932.1\| pyruvate carboxylase [Geobacillus kaustophilus HTA426], gi\|56379456\|dbj...	0.0	[3..1146]	[2..1145]
gi\|52785463, gi\|... - gi\|52785463\|ref\|YP_091292.1\| pyruvate carboxylase [Bacillus licheniformis ATCC 14580], gi\|52347965\|g...	0.0	[6..1146]	[5..1145]
PYC_BACSU - Pyruvate carboxylase OS=Bacillus subtilis GN=pyc PE=2 SV=1 PYC_BACSU - Pyruvate carboxylase OS=Bacillus subtilis (strain 168) GN=pyc PE=3 SV=1 gi\|221322879 - gi\|221322879\|ref\|ZP_03604173.1\| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221313683 - gi\|221313683\|ref\|ZP_03595488.1\| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. NCIB 36... gi\|221318605 - gi\|221318605\|ref\|ZP_03599899.1\| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. JH642]	0.0	[6..1147]	[5..1146]

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Predicted Domain #1

Region A:
Residues: [1-1148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLQRIQKV LVANRGEIAI RVFRACSELG LKTVAIYSKE DSGSYHRYKA DESYLVGEGK  60
   61 KPIDAYLDIE GIIEIAKSNH VDAIHPGYGF LSENIQFAKR CEEEGIIFIG PKSKHLDMFG 120
  121 DKVKARTQAQ LAQIPVIPGS DGPVDSLEEV KEFAEKYDYP IIIKASLGGG GRGMRIVRTS 180
  181 EELRESYNRA KSEAKAAFGN DEVYVEKFVE KPKHIEVQIL ADEEGNVVHL YERDCSVQRR 240
  241 HQKVVEIAPS VSLSDDLRQR ICEAAVKLTK NVNYLNAGTV EFLVKDDNFY FIEVNPRVQV 300
  301 EHTITEMITG VDIVQSQILI ADGHALHSKM VGVPKQEEVV VHGFAIQSRV TTEDPLNNFM 360
  361 PDTGKIMAYR SGGGFGVRLD TGNSFQGAVI APYYDSLLVK VTTWALTFEQ AAAKMERNLK 420
  421 EFRIRGIKTN IPFLENVVKH KNFLSGEYDT SFIDASPELF LFPKRKDRGT KMLNYIGTVT 480
  481 VNGFPGVGKK EKPIFPDARI PNVLHSEPIQ NGTKQILDER GADGLVKWVQ DQKRVLLTDT 540
  541 TFRDAHQSLL ATRIRTKDLH QIAEPTARML PNLFSAEMWG GATFDVAYRF LKEDPWERLL 600
  601 DLREKMPNVL FQMLLRSSNA VGYKNYPDNL IQKFVECSAQ AGIDVFRIFD SLNWVEGMRV 660
  661 AIDAVRDTGK IAEATMCYTG DIHDPMRSKY DLNYYKNLAK ELEVSGAHIL GIKDMAGLLK 720
  721 PNAAYDLVSA LKETVSIPIH LHTHDTSGNG ILTYTKAIEA GVDIVDVAVS SMAGQTSQPS 780
  781 ANTLYYALGG NERQPDVNID SLEKLSHYWE DVRKYYAPFE SGMNAPHTEV YMHEMPGGQY 840
  841 SNLQQQAKVV GLGDRFDEVK VMYRRVNDMF GDIVKVTPSS KVVGDMALFM VQNHLTEQDV 900
  901 LERGHSMDFP GSVVEMFSGD LGQPYGGFPK KLQEIILKGK EPLTVRPGEL LEPVDFDALK 960
  961 EELFHKLGRE VTMFDVVAYA LYPKVFMDYE KVAELYGNVS VLDTPTFFYG MRLGEEIDVE1020
 1021 IEQGKTLMVK LVSIGELQPD GNRVLYLEFN GQPREIVVKD ESVKATVAQR VKGNRENPNH1080
 1081 ISATMPGTVI KVVVKEGDEV KKGDSMAITE AMKMETTVQA PFNGKVKKVY VNDGDAIQTG1140
 1141 DLLIELDH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2qf7A
Description:	No description for 2qf7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits