YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258555, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	301 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258555, gi|....

Description	E-value	Query Range	Subject Range
MURB1_BACHK - UDP-N-acetylenolpyruvoylglucosamine reductase 1 OS=Bacillus thuringiensis subsp. konkukian GN=murB1 ... MURB1_BACHK - UDP-N-acetylenolpyruvoylglucosamine reductase 1 OS=Bacillus thuringiensis subsp. konkukian (strain 9...	2.0E-65	[1..301]	[1..301]
gi\|47557061, gi\|... - gi\|47565781\|ref\|ZP_00236820.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus G9241]...	3.0E-65	[1..301]	[1..301]
gi\|229157488, gi... - gi\|229157488\|ref\|ZP_04285565.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus ATCC ... MURB1_BACC1 - UDP-N-acetylenolpyruvoylglucosamine reductase 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=...	4.0E-65	[1..301]	[1..301]
MURB1_BACCZ - UDP-N-acetylenolpyruvoylglucosamine reductase 1 OS=Bacillus cereus (strain ZK / E33L) GN=murB1 PE=3 ...	2.0E-64	[1..301]	[1..301]
MURB_BACSU - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Bacillus subtilis GN=murB PE=3 SV=1 gi\|221322919 - gi\|221322919\|ref\|ZP_03604213.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus subtilis sub... MURB_BACSU - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Bacillus subtilis (strain 168) GN=murB PE=3 SV=1 gi\|221318646 - gi\|221318646\|ref\|ZP_03599940.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus subtilis sub... gi\|221313722 - gi\|221313722\|ref\|ZP_03595527.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus subtilis sub...	4.0E-64	[1..300]	[1..300]
MURB_STAS1 - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (...	4.0E-64	[3..300]	[5..301]
gi\|89200122, gi\|... - gi\|89200122\|ref\|ZP_01178877.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus subsp....	5.0E-64	[1..300]	[3..301]
gi\|75762943, gi\|... - gi\|75762943\|ref\|ZP_00742746.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus thuringiensis...	6.0E-64	[1..301]	[3..303]
MURB_STRTD - UDP-N-acetylenolpyruvoylglucosamine reductase OS=Streptococcus thermophilus (strain ATCC BAA-491 / L...	7.0E-64	[4..300]	[5..300]
MURB1_BACCR - UDP-N-acetylenolpyruvoylglucosamine reductase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM... gi\|229047594, gi... - gi\|229047594\|ref\|ZP_04193184.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus AH676... gi\|228654424, gi... - gi\|229129187\|ref\|ZP_04258160.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus BDRD-... gi\|229146481, gi... - gi\|229146481\|ref\|ZP_04274852.1\| UDP-N-acetylenolpyruvoylglucosamine reductase [Bacillus cereus BDRD-...	7.0E-64	[1..301]	[1..301]

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Predicted Domain #1

Region A:
Residues: [1-301]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLVNELIQ ANVGRVLVDE PLARYTTMKI GGPADILIVP KRVAGIEKTL QLVKKYKTKW  60
   61 TVIGRGSNLL VSDLGIEGVV IRLGEGLDHL EVEKHRVRVG GGYPLIKLST LLSRQGLAGL 120
  121 EFASGIPGSV GGAVYMNAGA HKSDISNILS KALILFEDGT IDWLTHGEME FSYRTSVLQT 180
  181 KRPGIVLEAE FQLQIGERER IVSVMQKNKD YRRETQPWNH PCAGSVFRNP TPYFAGDLIE 240
  241 KAGLRGYQIG GAQISEMHGN FIINTGGASA QDVLSLIALI KQTIKDKFGV EMHTEVEIIG 300
  301 R

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	64.30103
Match:	1hskA
Description:	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain; Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.907182340515553	bayes_pls_golite062009
binding	0.088001219122031	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: