YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258518, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	205 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258518, gi|....

Description	E-value	Query Range	Subject Range
gi\|68515275, gi\|... - gi\|68547058\|ref\|ZP_00586600.1\| Guanylate kinase [Shewanella amazonensis SB2B], gi\|68515275\|gb\|EAN389...	2.0E-57	[1..205]	[83..287]
gi\|151938955, gi... - gi\|75855786\|ref\|ZP_00763428.1\| COG0194: Guanylate kinase [Vibrio sp. Ex25], gi\|254228573\|ref\|ZP_0492...	5.0E-57	[5..205]	[21..222]
KGUA_SHIBS - Guanylate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=gmk PE=3 SV=1	1.0E-56	[5..205]	[3..204]
tr\|A0A0G3HV30\|A0... - Guanylate kinase OS=Escherichia coli (strain K12) GN=gmk PE=3 SV=2 gi\|115515044, gi... - gi\|117625920\|ref\|YP_859243.1\| guanylate kinase [Escherichia coli APEC O1], gi\|115515044\|gb\|ABJ03119.... gi\|110617222, gi... - gi\|110807674\|ref\|YP_691194.1\| guanylate kinase [Shigella flexneri 5 str. 8401], gi\|110617222\|gb\|ABF0... gi\|91213166, gi\|... - gi\|91213166\|ref\|YP_543152.1\| guanylate kinase [Escherichia coli UTI89], gi\|91074740\|gb\|ABE09621.1\| g... gi\|26110725, gi\|... - gi\|26250295\|ref\|NP_756335.1\| guanylate kinase [Escherichia coli CFT073], gi\|26110725\|gb\|AAN82909.1\|A... gi\|237703442, gi... - gi\|237703442\|ref\|ZP_04533923.1\| guanylate kinase [Escherichia sp. 3_2_53FAA], gi\|226902706\|gb\|EEH889... gi\|226838814, gi... - gi\|254038849\|ref\|ZP_04872901.1\| guanylate kinase [Escherichia sp. 1_1_43], gi\|226838814\|gb\|EEH70841.... gi\|24114918, gi\|... - ref\|NP_709428.1\| guanylate kinase [Shigella flexneri 2a str. 301], gb\|AAN45135.1\| guanylate kinase ...	1.0E-56	[5..205]	[22..223]
gi\|62182234, gi\|... - gi\|62182234\|ref\|YP_218651.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Choleraes...	1.0E-56	[5..205]	[32..233]
gi\|192956296, gi... - gi\|75234806\|ref\|ZP_00719109.1\| COG0194: Guanylate kinase [Escherichia coli E110019], gi\|193070357\|re... gi\|169753050, gi... - gi\|170018122\|ref\|YP_001723076.1\| guanylate kinase [Escherichia coli ATCC 8739], gi\|169753050\|gb\|ACA7... gi\|227883838, gi... - gi\|227883838\|ref\|ZP_04001643.1\| guanylate kinase [Escherichia coli 83972], gi\|227839116\|gb\|EEJ49582.... gi\|191170607, gi... - gi\|75242573\|ref\|ZP_00726317.1\| COG0194: Guanylate kinase [Escherichia coli F11], gi\|191170607\|ref\|ZP... KGUA_ECOL6 - Guanylate kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=gmk PE=3 SV=1 gi\|238861398, gi... - gi\|238902739\|ref\|YP_002928535.1\| guanylate kinase [Escherichia coli BW2952], gi\|238861398\|gb\|ACR6339... gi\|194430074, gi... - gi\|75208680\|ref\|ZP_00708977.1\| COG0194: Guanylate kinase [Escherichia coli B171], gi\|194430074\|ref\|Z... gi\|170683513, gi... - gi\|170683513\|ref\|YP_001745948.1\| guanylate kinase [Escherichia coli SMS-3-5], gi\|170521231\|gb\|ACB194... gi\|251786899, gi... - gi\|251786899\|ref\|YP_003001203.1\| hypothetical protein B21_03457 [Escherichia coli BL21], gi\|24237917... gi\|75229039, gi\|... - gi\|75229039\|ref\|ZP_00715623.1\| COG0194: Guanylate kinase [Escherichia coli B7A], gi\|191167817\|ref\|ZP... gi\|170083155, gi... - gi\|170083155\|ref\|YP_001732475.1\| guanylate kinase [Escherichia coli str. K-12 substr. DH10B], gi\|169... gi\|254290326, gi... - gi\|254290326\|ref\|YP_003056074.1\| guanylate kinase [Escherichia coli BL21(DE3)], gi\|253979633\|gb\|ACT4... KGUA_SHISS - Guanylate kinase OS=Shigella sonnei (strain Ss046) GN=gmk PE=3 SV=1 gi\|215488943, gi... - gi\|215488943\|ref\|YP_002331374.1\| guanylate kinase [Escherichia coli O127:H6 str. E2348/69], gi\|21526... gi\|253975477, gi... - gi\|254163576\|ref\|YP_003046684.1\| guanylate kinase [Escherichia coli B str. REL606], gi\|253975477\|gb\|... gi\|89110364, gi\|... - gi\|89110364\|ref\|AP_004144.1\| guanylate kinase [Escherichia coli str. K-12 substr. W3110], gi\|8567639... gi\|209914380, gi... - gi\|209921121\|ref\|YP_002295205.1\| guanylate kinase [Escherichia coli SE11], gi\|209914380\|dbj\|BAG79454... gi\|193063870, gi... - gi\|75258189\|ref\|ZP_00729637.1\| COG0194: Guanylate kinase [Escherichia coli E22], gi\|193063870\|ref\|ZP... gi\|218556211, gi... - gi\|218556211\|ref\|YP_002389124.1\| guanylate kinase [Escherichia coli IAI1], gi\|218362979\|emb\|CAR00617... gi\|188493067, gi... - gi\|75514289\|ref\|ZP_00736597.1\| COG0194: Guanylate kinase [Escherichia coli 53638], gi\|188493067\|ref\|... gi\|218551175, gi... - gi\|218551175\|ref\|YP_002384966.1\| guanylate kinase [Escherichia fergusonii ATCC 35469], gi\|218358716\|... gi\|194430992, gi... - gi\|83571435\|ref\|ZP_00922875.1\| COG0194: Guanylate kinase [Shigella dysenteriae 1012], gi\|194430992\|r... KGUA_ECOL5 - Guanylate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=gmk PE=3 SV=1 gi\|75188406, gi\|... - gi\|75188406\|ref\|ZP_00701673.1\| COG0194: Guanylate kinase [Escherichia coli E24377A], gi\|157158438\|re... gi\|75197551, gi\|... - gi\|75197551\|ref\|ZP_00707621.1\| COG0194: Guanylate kinase [Escherichia coli HS], gi\|157163129\|ref\|YP_... gi\|83588505, gi\|... - gi\|83588505\|ref\|ZP_00927129.1\| COG0194: Guanylate kinase [Escherichia coli 101-1], gi\|194435575\|ref\|... gi\|187427844, gi... - gi\|75179693\|ref\|ZP_00699680.1\| COG0194: Guanylate kinase [Shigella boydii BS512], gi\|187730852\|ref\|Y... gi\|30043337, gi\|... - gi\|30065076\|ref\|NP_839247.1\| guanylate kinase [Shigella flexneri 2a str. 2457T], gi\|30043337\|gb\|AAP1... EG10965 - guanylate kinase / Guanylate kinase gi\|218429495, gi... - gi\|218691931\|ref\|YP_002400143.1\| guanylate kinase [Escherichia coli ED1a], gi\|218429495\|emb\|CAR10460... gi\|218367489, gi... - gi\|218560720\|ref\|YP_002393633.1\| guanylate kinase [Escherichia coli S88], gi\|218367489\|emb\|CAR05271.... gi\|218702417, gi... - gi\|218702417\|ref\|YP_002410046.1\| guanylate kinase [Escherichia coli IAI39], gi\|218372403\|emb\|CAR2027... gi\|218697369, gi... - gi\|218697369\|ref\|YP_002405036.1\| guanylate kinase [Escherichia coli 55989], gi\|218354101\|emb\|CAV0066... gi\|218707282, gi... - gi\|218707282\|ref\|YP_002414801.1\| guanylate kinase [Escherichia coli UMN026], gi\|218434379\|emb\|CAR153... KGUA_SHIFL - Guanylate kinase OS=Shigella flexneri GN=gmk PE=3 SV=1 EG10965 - guanylate kinase / Guanylate kinase gi\|124528989, gi... - gi\|124528989\|ref\|ZP_01700135.1\| Guanylate kinase [Escherichia coli B], gi\|124500128\|gb\|EAY47605.1\| G... KGUA_ECOUT - Guanylate kinase OS=Escherichia coli (strain UTI89 / UPEC) GN=gmk PE=3 SV=2 KGUA_ECOL6 - Guanylate kinase OS=Escherichia coli O6 GN=gmk PE=3 SV=1 gi\|56480395, gi\|... - gi\|56480395\|ref\|NP_709428.2\| guanylate kinase [Shigella flexneri 2a str. 301], gi\|56383946\|gb\|AAN451... KGUA_ECOLI - Guanylate kinase (EC 2.7.4.8) (GMP kinase) - Escherichia coli	1.0E-56	[5..205]	[3..204]
KGUA_SALTI - Guanylate kinase OS=Salmonella typhi GN=gmk PE=3 SV=1 gi\|238910219 - gi\|238910219\|ref\|ZP_04654056.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Tennes... gi\|29139695, gi\|... - gi\|29144059\|ref\|NP_807401.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi str... gi\|16762570 - gi\|16762570\|ref\|NP_458187.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi str... gi\|194403084, gi... - gi\|194444421\|ref\|YP_002042989.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Newpo... gi\|205344498, gi... - gi\|205344498\|gb\|EDZ31262.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Weltevrede... gi\|195632364, gi... - gi\|195632364\|gb\|EDX50848.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Newport st... gi\|205350298, gi... - gi\|205350298\|gb\|EDZ36929.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Hadar str.... gi\|197214908, gi... - gi\|197251205\|ref\|YP_002148671.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Agona... gi\|194710463, gi... - gi\|194734961\|ref\|YP_002116683.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Schwa... gi\|194457854, gi... - gi\|194471490\|ref\|ZP_03077474.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Kentuc... gi\|194405755, gi... - gi\|194447451\|ref\|YP_002047771.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Heide... gi\|161505723, gi... - gi\|161505723\|ref\|YP_001572835.1\| guanylate kinase [Salmonella enterica subsp. arizonae serovar 62:z4... KGUA_SALTI - Guanylate kinase OS=Salmonella typhi GN=gmk PE=3 SV=1 KGUA_SALPA - Guanylate kinase OS=Salmonella paratyphi A GN=gmk PE=3 SV=1 gi\|205338742, gi... - gi\|205338742\|gb\|EDZ25506.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg... gi\|168235355, gi... - gi\|197291626\|gb\|EDY30978.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Schwarzeng... gi\|168233265, gi... - gi\|205332519\|gb\|EDZ19283.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Kentucky s... gi\|205325655, gi... - gi\|205325655\|gb\|EDZ13494.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul ... gi\|213857743 - gi\|213857743\|ref\|ZP_03384714.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|213647936 - gi\|213647936\|ref\|ZP_03377989.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|213620561 - gi\|213620561\|ref\|ZP_03373344.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|213421706 - gi\|213421706\|ref\|ZP_03354772.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|224470066, gi... - gi\|224585538\|ref\|YP_002639337.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Parat... gi\|213999670 - gi\|213999670\|ref\|ZP_03410405.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|200387659, gi... - gi\|200387659\|ref\|ZP_03214271.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Vircho... gi\|198243873, gi... - gi\|198243873\|ref\|YP_002217700.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Dubli... KGUA_SALPA - Guanylate kinase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=gmk PE=3 SV=1 gi\|197096034, gi... - gi\|197364557\|ref\|YP_002144194.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Parat... gi\|197264511, gi... - gi\|197264511\|ref\|ZP_03164585.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Saintp... gi\|213052649 - gi\|213052649\|ref\|ZP_03345527.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Typhi ... gi\|206710780, gi... - gi\|207858977\|ref\|YP_002245628.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Enter... gi\|205354658, gi... - gi\|205354658\|ref\|YP_002228459.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Galli... gi\|204322172, gi... - gi\|204928739\|ref\|ZP_03219938.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar Javian...	2.0E-56	[5..205]	[3..204]
gi\|78506411, gi\|... - gi\|78685913\|ref\|ZP_00850687.1\| Guanylate kinase [Shewanella sp. ANA-3], gi\|78506411\|gb\|EAP19930.1\| G...	2.0E-56	[1..205]	[18..221]
gi\|90437368, gi\|... - gi\|90581391\|ref\|ZP_01237186.1\| guanylate kinase [Vibrio angustum S14], gi\|90437368\|gb\|EAS62564.1\| gu...	3.0E-56	[5..205]	[3..204]
KGUA_SALTY - Guanylate kinase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gmk PE=3 SV=1 gi\|167995214, gi... - gi\|205327075\|gb\|EDZ13839.1\| guanylate kinase [Salmonella enterica subsp. enterica serovar 4,[5],12:i... lcl\|NC_016856.1_... - [gene=gmk] [protein=guanylate kinase] [protein_id=YP_005239985.1] [location=3946790..3947413] KGUA_SALTY - Guanylate kinase OS=Salmonella typhimurium GN=gmk PE=3 SV=1 KGUA_SALTY - Guanylate kinase OS=Salmonella typhimurium GN=gmk PE=3 SV=1	4.0E-56	[5..205]	[3..204]

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Predicted Domain #1

Region A:
Residues: [1-205]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRRGLLIV LSGPSGVGKG TVRKELFSHE DTRFQYSISV TTRKPREGEV DGVDYFFKER  60
   61 EEFEEMIRNE KLLEWAEFVG NYYGTPIDYV EKTLQEGKDV FLEIEVQGAI QVKKAFPEGV 120
  121 FIFLAPPSLS ELKNRIVGRG TETEDVIENR LTVAKEEIDM MDAYDYVVEN DQVELACERI 180
  181 KAIVVGEHCR RERVAKYYKE MTEGL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.221849
Match:	2j41A
Description:	No description for 2j41A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits