YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258431, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	192 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258431, gi|....

Description	E-value	Query Range	Subject Range
gi\|51975174, gi\|... - gi\|52141705\|ref\|YP_085123.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac...	6.0E-33	[1..192]	[1..192]
gi\|221241286, gi... - gi\|222097228\|ref\|YP_002531285.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|49478371, gi\|... - gi\|49478371\|ref\|YP_037843.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|42782866, gi\|... - gi\|42782866\|ref\|NP_980113.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac...	8.0E-33	[1..192]	[1..192]
gi\|152024899, gi... - gi\|89203683\|ref\|ZP_01182292.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [B...	2.0E-32	[1..192]	[1..192]
gi\|29897429, gi\|... - gi\|30021873\|ref\|NP_833504.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|228980335, gi... - gi\|228980335\|ref\|ZP_04140646.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|218232647, gi... - gi\|218232647\|ref\|YP_002368584.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|218543080, gi... - gi\|218898881\|ref\|YP_002447292.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ...	2.0E-32	[1..192]	[1..192]
gi\|23099077, gi\|... - gi\|23099077\|ref\|NP_692543.1\| phosphatidylglycerophosphate synthase [Oceanobacillus iheyensis HTE831]...	5.0E-31	[1..192]	[1..192]
gi\|56379670, gi\|... - gi\|56419828\|ref\|YP_147146.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pho...	9.0E-31	[1..192]	[1..192]
PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis GN=pgsA PE=3... gi\|16078755, gi\|... - gi\|2634064\|emb\|CAB13565.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subtilis ...	1.0E-30	[2..191]	[3..192]
gi\|221313891 - gi\|221313891\|ref\|ZP_03595696.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis (strain 168)... gi\|221323086 - gi\|221323086\|ref\|ZP_03604380.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... gi\|221318814 - gi\|221318814\|ref\|ZP_03600108.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis GN=pgsA PE=3...	2.0E-30	[2..191]	[3..192]
gi\|52785674, gi\|... - gi\|52785674\|ref\|YP_091503.1\| hypothetical protein BLi01916 [Bacillus licheniformis ATCC 14580], gi\|5...	8.0E-30	[2..191]	[3..192]
gi\|68195733, gi\|... - gi\|69245482\|ref\|ZP_00603446.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [E...	1.0E-29	[1..183]	[1..183]

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Predicted Domain #1

Region A:
Residues: [1-192]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPNKITIS RIFLIPIFMV IMLAPFDWGS YTIGDVDLPI QHLVGALIFI VASATDWIDG  60
   61 HYARKYNLVT NLGKFLDPLA DKLLVSAALI TLVEMQYVPA WIVIIIISRE FAVTGLRLVL 120
  121 AGTGEVVAAN QLGKIKTWTQ IIAIAAYLLH DVPLNLIHIP VADIFIWIAL IFTVISGWDY 180
  181 FWKNRAAFVN SK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	35.585027
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits