YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263773, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	234 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263773, gi|....

Description	E-value	Query Range	Subject Range
gi\|222450603, gi... - gi\|222526724\|ref\|YP_002571195.1\| ABC transporter related [Chloroflexus sp. Y-400-fl], gi\|222450603\|g... gi\|163670063, gi... - gi\|76261358\|ref\|ZP_00768971.1\| ABC transporter related [Chloroflexus aurantiacus J-10-fl], gi\|761637...	8.0E-81	[2..232]	[7..242]
gi\|54309366, gi\|... - gi\|54309366\|ref\|YP_130386.1\| putative amino acid ABC transporter, ATP-binding protein [Photobacteriu...	2.0E-79	[1..232]	[30..266]
gi\|49328743, gi\|... - gi\|49477187\|ref\|YP_035548.1\| ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar ko...	6.0E-79	[1..233]	[34..266]
gi\|30019475, gi\|... - gi\|30019475\|ref\|NP_831106.1\| 2-aminoethylphosphonate transport ATP-binding protein phnT [Bacillus ce... gi\|218160136, gi... - gi\|218232179\|ref\|YP_002366105.1\| ABC transporter, ATP-binding protein [Bacillus cereus B4264], gi\|21...	6.0E-79	[1..233]	[1..233]
gi\|46143847 - gi\|46143847\|ref\|ZP_00204582.1\| COG3842: ABC-type spermidine/putrescine transport systems, ATPase com... gi\|165875837, gi... - gi\|165975736\|ref\|YP_001651329.1\| putrescine/spermidine ABC transporter ATPase protein [Actinobacillu... gi\|126207768, gi... - gi\|126207768\|ref\|YP_001052993.1\| putrescine/spermidine ABC transporter ATPase protein [Actinobacillu...	7.0E-79	[3..232]	[7..237]
gi\|119720457, gi... - gi\|119720457\|ref\|YP_920952.1\| spermidine/putrescine ABC transporter ATPase subunit [Thermofilum pend...	8.0E-79	[4..233]	[2..232]
gi\|194467497, gi... - gi\|92090286\|ref\|ZP_01275165.1\| ABC transporter related [Lactobacillus reuteri 100-23], gi\|91802944\|g...	9.0E-79	[6..232]	[7..238]
gi\|11528330 - gi\|11528330\|gb\|AAG37225.1\|AF298223_3 glutamine ABC transporter, ATP-binding subunit [Methanococcus m... gi\|45047352, gi\|... - gi\|45357792\|ref\|NP_987349.1\| amino acid ABC transporter ATP-binding protein [Methanococcus maripalud...	1.0E-78	[5..232]	[1..233]
gi\|148530372, gi... - gi\|89091775\|ref\|ZP_01164743.1\| ATPas [Lactobacillus reuteri JCM 1112], gi\|89078406\|gb\|EAR57769.1\| AT... gi\|227070503, gi... - gi\|227364410\|ref\|ZP_03848500.1\| ABC superfamily ATP binding cassette transporter, ABC protein [Lacto... gi\|227531705, gi... - gi\|227531705\|ref\|ZP_03961754.1\| ABC superfamily ATP binding cassette transporter, ABC protein [Lacto...	1.0E-78	[6..232]	[7..238]
gi\|241908953, gi... - gi\|241908953\|ref\|ZP_04793511.1\| ABC transporter related protein [Desulfovibrio vulgaris RCH1], gi\|24... gi\|46578522, gi\|... - gi\|46578522\|ref\|YP_009330.1\| glutamine ABC transporter, ATP-binding protein [Desulfovibrio vulgaris ...	1.0E-78	[1..233]	[1..237]

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Predicted Domain #1

Region A:
Residues: [1-234]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEIMLETKN LCKTFRQQSV VQNISLSVPK YAIYGLLGPN GAGKSTTLKM ITGMLIPTSG  60
   61 EIYFDGHKWT RHDLHSIGAL IDSPPLYENL TARENLQVRT TVLGLPKSRI DEVLHVVELE 120
  121 NTEKKKAKDF SMGMKQRLGI AIALLNHPKF LILDEPMNGL DPFGIQELRK LILSFPGKGI 180
  181 TVILSSHILS EVSQIADHVG IISGGVLGYQ GKLNKNDDLE DLFVQVAGKY RREA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.69897
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits