YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258386, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	176 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258386, gi|....

Description	E-value	Query Range	Subject Range
gi\|2935421 - gi\|2935421\|gb\|AAC25987.1\| adaptive response regulatory protein [Pseudoalteromonas sp. S9]	1.0E-56	[2..175]	[178..352]
gi\|163863623, gi... - gi\|89207781\|ref\|ZP_01186313.1\| Methylated-DNA-(protein)-cysteine S-methyltransferase [Bacillus weihe...	1.0E-55	[1..176]	[1..176]
gi\|49329912, gi\|... - gi\|49478356\|ref\|YP_037806.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus thuringi...	6.0E-55	[1..176]	[1..176]
gi\|42782823, gi\|... - gi\|42782823\|ref\|NP_980070.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus cereus A...	5.0E-54	[1..176]	[1..176]
gi\|51975218, gi\|... - gi\|52141749\|ref\|YP_085080.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus cereus E...	6.0E-54	[1..176]	[1..176]
gi\|25286136 - pir\|\|E83777 O6-methylguanine DNA alkyltransferase dat [imported] - Bacillus halodurans (strain C-125... gi\|15613584, gi\|... - gi\|15613584\|ref\|NP_241887.1\| O6-methylguanine DNA alkyltransferase [Bacillus halodurans C-125], gi\|1...	1.0E-53	[4..171]	[1..170]
OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans GN=ogt PE=3 SV=1 OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans (strain ATCC 35395 ...	1.0E-52	[9..170]	[1..154]
gi\|77459163, gi\|... - gi\|77459163\|ref\|YP_348669.1\| AraC family transcriptional regulator [Pseudomonas fluorescens Pf0-1], ...	2.0E-52	[2..170]	[186..353]
gi\|186467753, gi... - gi\|23130248\|ref\|ZP_00112065.1\| COG2169: Adenosine deaminase [Nostoc punctiforme PCC 73102], gi\|18668...	2.0E-52	[2..169]	[185..351]
gi\|63257301, gi\|... - gi\|66046594\|ref\|YP_236435.1\| methylated-DNA-[protein]-cysteine S-methyltransferase [Pseudomonas syri...	4.0E-52	[3..172]	[208..376]

Back

Predicted Domain #1

Region A:
Residues: [1-176]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSYKNKFIY WTLLTHANWK FHIAATESGL CFIGSQDEQF EELNIWARKK LPQYILIHSP  60
   61 DYLQVYTKEI IEYLKNKRET FTFPIDAYGT AFQLSVWNTV REIPYGKTYS YTEIADRIQK 120
  121 PTAVRAVASA IAANPILITI PCHRVIGKNG KLTGFRGGLE MKKELLVLEK LQVEFI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.69897
Match:	1sfeA
Description:	ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
methylated-DNA-[protein]-cysteine S-methyltransferase activity	3.9938943760254	bayes_pls_golite062009
S-methyltransferase activity	2.96219931728042	bayes_pls_golite062009
catalytic activity	2.27882522649583	bayes_pls_golite062009
methyltransferase activity	1.63681159093596	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	1.6341981985862	bayes_pls_golite062009
transferase activity	1.42883081715544	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: