YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263657, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263657, gi|....

Description	E-value	Query Range	Subject Range
gi\|51975297, gi\|... - gi\|52141828\|ref\|YP_085001.1\| prophage pi2 protein 39 [Bacillus cereus E33L], gi\|51975297\|gb\|AAU16847...	3.0E-57	[1..197]	[1..197]
gi\|89153388, gi\|... - gi\|89208688\|ref\|ZP_01187181.1\| Phage major tail protein phi13 [Bacillus weihenstephanensis KBAB4], g...	3.0E-56	[1..197]	[1..197]
gi\|16801633 - gi\|16801633\|ref\|NP_471901.1\| hypothetical protein lin2571 [Listeria innocua Clip11262] gi\|25516491, gi\|... - pir\|\|AF1753 Orf50 [bacteriophage bIL285] homolog lin2571 [imported] - Listeria innocua (strain Clip1...	6.0E-55	[3..194]	[5..192]
gi\|74489842, gi\|... - gi\|75762662\|ref\|ZP_00742503.1\| prophage pi2 protein 39 [Bacillus thuringiensis serovar israelensis A...	2.0E-49	[1..197]	[1..195]
gi\|109647289, gi... - gi\|68207374\|ref\|ZP_00559538.1\| Phage major tail protein phi13 [Desulfitobacterium hafniense DCB-2], ...	1.0E-47	[5..197]	[1..193]
gi\|165870680, gi... - gi\|165870680\|ref\|ZP_02215333.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|167640814, gi... - gi\|167640814\|ref\|ZP_02399073.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|167634697, gi... - gi\|167634697\|ref\|ZP_02393016.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|170127901, gi... - gi\|170707123\|ref\|ZP_02897579.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|170688606, gi... - gi\|170688606\|ref\|ZP_02879812.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|190561272, gi... - gi\|190567485\|ref\|ZP_03020398.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|172080360, gi... - gi\|177654975\|ref\|ZP_02936669.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|49183480, gi\|... - gi\|49183480\|ref\|YP_026732.1\| prophage LambdaBa04, major tail protein, putative [Bacillus anthracis s... gi\|227816654, gi... - gi\|227816654\|ref\|YP_002816663.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthraci... gi\|229603326, gi... - gi\|229603326\|ref\|YP_002865080.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthraci... gi\|254686866 - gi\|254686866\|ref\|ZP_05150724.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|254725945, gi... - gi\|254725945\|ref\|ZP_05187727.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|254738908 - gi\|254738908\|ref\|ZP_05196610.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|254744498 - gi\|254744498\|ref\|ZP_05202177.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|47777821, gi\|... - gi\|47777821\|ref\|YP_017093.2\| prophage lambdaba04, major tail protein, putative [Bacillus anthracis s... gi\|254756247 - gi\|254756247\|ref\|ZP_05208276.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|30260636, gi\|... - gi\|30260636\|ref\|NP_843013.1\| prophage LambdaBa04, major tail protein, putative [Bacillus anthracis s... gi\|254762066 - gi\|254762066\|ref\|ZP_05213915.1\| putative prophage LambdaBa04, major tail protein [Bacillus anthracis... gi\|21398425, gi\|... - gi\|65317899\|ref\|ZP_00390858.1\| hypothetical protein Bant_01001100 [Bacillus anthracis str. A2012], r...	1.0E-47	[3..190]	[2..186]
gi\|50914479, gi\|... - gi\|50914479\|ref\|YP_060451.1\| prophage pi2 protein 39 [Streptococcus pyogenes MGAS10394], gi\|50903553... gi\|40218577, gi\|... - gi\|50261622\|gb\|AAT72390.1\| unknown [Streptococcus pyogenes], gi\|40218577\|gb\|AAR83231.1\| hypothetical...	4.0E-46	[3..197]	[4..193]
gi\|25401419 - pir\|\|F86755 prophage pi2 protein 39 [imported] - Lactococcus lactis subsp. lactis (strain IL1403) gi\|13095730, gi\|... - gi\|13095730\|ref\|NP_076622.1\| Orf50 [Lactococcus phage bIL285], gi\|12830919\|gb\|AAK08275.1\|AF323668_50... gi\|12723999, gi\|... - gi\|15673028\|ref\|NP_267202.1\| prophage pi2 protein 39 [Lactococcus lactis subsp. lactis Il1403], gi\|1...	5.0E-46	[3..189]	[6..187]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENKVSFGL KNVHYATYET KDGVVTFGTP IPLPGAVELT NEPRGDLIEF YADDMLYYSA  60
   61 DNNQGYEGTL NIALLPEQFA IDALGEQLDE TDGVLNELAD AKGKPFALLF EFDGDVKATR 120
  121 HVMYNCSASR PNISSKSKTN SAEPNTNELK FVASPIILAT GGRPMVKTKT TSKTTPAIHD 180
  181 NWYKKVYVKT PTAPKGA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits