YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263649, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	141 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263649, gi|....

Description	E-value	Query Range	Subject Range
gi\|50903547, gi\|... - gi\|50914473\|ref\|YP_060445.1\| holin [Streptococcus pyogenes MGAS10394], gi\|50903547\|gb\|AAT87262.1\| Ph...	2.0E-41	[1..137]	[623..760]
gi\|50261628, gi\|... - gi\|50261628\|gb\|AAT72396.1\| unknown [Streptococcus pyogenes], gi\|40218583\|gb\|AAR83237.1\| phage tail-h...	2.0E-41	[1..137]	[623..760]
gi\|81097479 - gi\|81097479\|gb\|ABB55422.1\| putative holin [Bacteriophage gamma] gi\|83658685 - gi\|83658685\|gb\|ABC40468.1\| putative phage holin [Bacillus anthracis phage Gamma isolate d'Herelle] gi\|83658631, gi\|... - gi\|85701395\|ref\|YP_459980.1\| phage holin [Bacillus phage WBeta], gi\|83658631\|gb\|ABC40415.1\| phage ho... gi\|196033330, gi... - gi\|196033330\|ref\|ZP_03100742.1\| putative prophage LambdaBa01, holin [Bacillus cereus W], gi\|19599376... gi\|89152494, gi\|... - gi\|89152494\|ref\|YP_512325.1\| holin [Bacillus phage Fah], gi\|76445717\|gb\|ABA42707.1\| holin [Bacillus ... gi\|76564134, gi\|... - gi\|77020172\|ref\|YP_338199.1\| holin [Bacillus phage Gamma], gi\|76564134\|gb\|ABA46521.1\| holin [Bacillu... gi\|77020225, gi\|... - gi\|77020225\|ref\|YP_338148.1\| holin [Bacillus phage Cherry], gi\|76564015\|gb\|ABA46405.1\| holin [Bacill...	3.0E-40	[1..140]	[1..140]
gi\|164712102, gi... - gi\|165872155\|ref\|ZP_02216794.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0488],... gi\|49186784, gi\|... - gi\|49186784\|ref\|YP_030036.1\| prophage LambdaBa02, holin, putative [Bacillus anthracis str. Sterne], ... gi\|167531140, gi... - gi\|167633734\|ref\|ZP_02392058.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0442],... gi\|47504516, gi\|... - gi\|47529368\|ref\|YP_020717.1\| prophage lambdaba02, holin, putative [Bacillus anthracis str. 'Ames Anc... gi\|167511024, gi... - gi\|167640974\|ref\|ZP_02399231.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0193],... gi\|170688733, gi... - gi\|170688733\|ref\|ZP_02879937.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0465],... gi\|170705780, gi... - gi\|170705780\|ref\|ZP_02896243.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0389],... gi\|172080775, gi... - gi\|177654285\|ref\|ZP_02936214.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0174],... gi\|190563083, gi... - gi\|190566164\|ref\|ZP_03019083.1\| putative prophage LambdaBa02, holin [Bacillus anthracis Tsiankovskii... gi\|30263936, gi\|... - gi\|30263936\|ref\|NP_846313.1\| prophage LambdaBa02, holin, putative [Bacillus anthracis str. Ames], gi... gi\|65321261, gi\|... - gi\|65321261\|ref\|ZP_00394220.1\| COG4824: Phage-related holin (Lysis protein) [Bacillus anthracis str.... gi\|227006850, gi... - gi\|227813156\|ref\|YP_002813165.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. CDC 68... gi\|229603056, gi... - gi\|229603056\|ref\|YP_002868170.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A0248]... gi\|254683633 - gi\|254683633\|ref\|ZP_05147493.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. CNEVA-9... gi\|254721469 - gi\|254721469\|ref\|ZP_05183258.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. A1055] gi\|254735975 - gi\|254735975\|ref\|ZP_05193681.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. Western... gi\|254743869 - gi\|254743869\|ref\|ZP_05201552.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. Kruger ... gi\|254754355 - gi\|254754355\|ref\|ZP_05206390.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. Vollum] gi\|254757953 - gi\|254757953\|ref\|ZP_05209980.1\| putative prophage LambdaBa02, holin [Bacillus anthracis str. Austral...	4.0E-40	[1..140]	[1..140]
gi\|30020726, gi\|... - gi\|30020726\|ref\|NP_832357.1\| holin [Bacillus cereus ATCC 14579], gi\|29896278\|gb\|AAP09558.1\| holin [B... gi\|31415864 - gi\|31415864\|ref\|NP_852604.1\| holin [Bacillus phage phBC6A52] gi\|228652516, gi... - gi\|229130924\|ref\|ZP_04259853.1\| Holin [Bacillus cereus BDRD-Cer4], gi\|228652516\|gb\|EEL08425.1\| Holin...	5.0E-39	[1..140]	[1..140]
gi\|228855035, gi... - gi\|228904608\|ref\|ZP_04068682.1\| Holin [Bacillus thuringiensis IBL 4222], gi\|228855035\|gb\|EEM99620.1\|... gi\|75761812, gi\|... - gi\|75761812\|ref\|ZP_00741745.1\| Holin [Bacillus thuringiensis serovar israelensis ATCC 35646], gi\|744...	5.0E-39	[2..140]	[20..158]
gi\|89207439, gi\|... - gi\|89207439\|ref\|ZP_01185980.1\| Holin, toxin secretion/phage lysis [Bacillus weihenstephanensis KBAB4...	2.0E-38	[1..140]	[1..140]
gi\|152976641, gi... - gi\|89202389\|ref\|ZP_01181114.1\| Holin, toxin secretion/phage lysis [Bacillus cereus subsp. cytotoxis ...	3.0E-37	[1..140]	[1..145]
gi\|57234190, gi\|... - gi\|57234190\|ref\|YP_181786.1\| holin [Dehalococcoides ethenogenes 195], gi\|57224638\|gb\|AAW39695.1\| hol...	7.0E-36	[1..139]	[1..140]

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Predicted Domain #1

Region A:
Residues: [1-141]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRIDVLLKI FIATFGDFCG YFLGGWDATL KILVTMAVID YLTGMIAAGY NGELKSKVGF  60
   61 KGIAKKVVLF LLVGAAAQLD SALGSNSAIR EATIFFFMGN ELLSLLENAG RMGIPLPQAL 120
  121 TNAVEILGGK QKQEEKKGDV L

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	26.309804
Match:	PF05105.3
Description:	No description for PF05105.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits