YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258269, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	312 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258269, gi|....

Description	E-value	Query Range	Subject Range
gi\|52141855, gi\|... - gi\|52141855\|ref\|YP_084976.1\| phosphonate ABC transporter, phosphate-binding protein [Bacillus cereus...	8.0E-51	[1..312]	[39..350]
gi\|29897339, gi\|... - gi\|30021783\|ref\|NP_833414.1\| phosphonates-binding protein [Bacillus cereus ATCC 14579], gi\|29897339\|...	5.0E-50	[1..312]	[8..319]
gi\|229123203, gi... - gi\|229123203\|ref\|ZP_04252409.1\| Phosphonate ABC transporter, phosphate-binding protein [Bacillus cer... gi\|228947304, gi... - gi\|228947304\|ref\|ZP_04109598.1\| Phosphonate ABC transporter, phosphate-binding protein [Bacillus thu... gi\|65320957 - gi\|65320957\|ref\|ZP_00393916.1\| COG3221: ABC-type phosphate/phosphonate transport system, periplasmic...	1.0E-49	[1..312]	[17..328]
gi\|42738700, gi\|... - gi\|42782773\|ref\|NP_980020.1\| phosphonate ABC transporter, phosphonate-binding protein, putative [Bac... gi\|222097150, gi... - gi\|222097150\|ref\|YP_002531207.1\| phosphonate ABC transporter, phosphate-binding protein [Bacillus ce... gi\|206978287, gi... - gi\|206978287\|ref\|ZP_03239164.1\| putative phosphonate ABC transporter, phosphonate-binding protein [B...	3.0E-49	[1..312]	[1..312]
gi\|47569211, gi\|... - gi\|47569211\|ref\|ZP_00239897.1\| phosphonate ABC transporter, phosphonate-binding protein [Bacillus ce...	4.0E-49	[1..312]	[1..312]
gi\|49330991, gi\|... - gi\|49479435\|ref\|YP_037762.1\| phosphonate ABC transporter, phosphate-binding protein [Bacillus thurin...	1.0E-48	[1..312]	[1..312]
gi\|82749857, gi\|... - gi\|82749857\|ref\|YP_415598.1\| transport protein [Staphylococcus aureus RF122], gi\|82655388\|emb\|CAI797...	8.0E-44	[2..310]	[1..315]
gi\|251803778, gi... - gi\|251812705\|ref\|ZP_04827178.1\| ABC superfamily ATP binding cassette transporter, binding protein [S... gi\|49243464, gi\|... - gi\|49485021\|ref\|YP_042242.1\| putative lipoprotein [Staphylococcus aureus subsp. aureus MSSA476], gi\|... gi\|21281846, gi\|... - gi\|21281846\|ref\|NP_644932.1\| hypothetical protein MW0117 [Staphylococcus aureus subsp. aureus MW2], ...	1.0E-43	[2..310]	[1..315]
gi\|161508412, gi... - gi\|161508412\|ref\|YP_001574071.1\| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. a... gi\|87162344\|ref\|... - phosphonate ABC transporter, phosphonate-binding protein [Staphylococcus aureus subsp. aureus USA300... gi\|49482386, gi\|... - gi\|49482386\|ref\|YP_039610.1\| putative lipoprotein [Staphylococcus aureus subsp. aureus MRSA252], gi\|... gi\|221140689 - gi\|221140689\|ref\|ZP_03565182.1\| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. au... gi\|221138802 - gi\|221138802\|ref\|ZP_03563604.1\| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. au... gi\|87201476, gi\|... - gi\|88193918\|ref\|YP_498705.1\| phosphonate ABC transporter, substrate-binding protein, putative [Staph... gi\|57651149, gi\|... - gi\|57651149\|ref\|YP_185032.1\| phosphonate ABC transporter, phosphonate-binding protein [Staphylococcu... gi\|87162344, gi\|... - gi\|87162344\|ref\|YP_492862.1\| phosphonate ABC transporter, phosphonate-binding protein [Staphylococcu... gi\|253730496, gi... - gi\|253730496\|ref\|ZP_04864661.1\| ABC superfamily ATP binding cassette transporter, binding protein [S...	3.0E-43	[2..310]	[1..315]
gi\|56963023, gi\|... - gi\|56963023\|ref\|YP_174750.1\| phosphate/phosphonate ABC transporter substrate-binding protein [Bacill...	3.0E-43	[2..310]	[1..310]

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Predicted Domain #1

Region A:
Residues: [1-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKFFAMST TVVLAAGLLS GCGTKESSAN KNADTKKGYV PKTLNVQFVP SQNADTLEAK  60
   61 AKPLEKLLSD KLNIPVKVSI STNYNTIVEA MASKQVDVGF LPPTAYVLAH EKKAANVILQ 120
  121 AQRFGVDDET GAPKKDLVDF YKSEFVVKKD SNINSVKDLK GKKIGYQDVT SSAGYVWPAA 180
  181 VLLKEGVDPL KDVKPVTLKG HDQSLIALLN GDVDAAVVFQ DARNIVKKDY PNIFDQTKIV 240
  241 KFTEKIPNDT ISVRSDLDEE WSKKLQDAFI EIGKNEEGHK IIKEVYSHEG YVKSDDSKFD 300
  301 IVREYGKKVK TQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.045757
Match:	2ia4A
Description:	No description for 2ia4A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits