YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49180356, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	510 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49180356, gi|....

Description	E-value	Query Range	Subject Range
gi\|49478302, gi\|... - gi\|49478302\|ref\|YP_037708.1\| S-layer protein [Bacillus thuringiensis serovar konkukian str. 97-27], ...	0.0	[1..510]	[1..510]
gi\|65320906 - gi\|65320906\|ref\|ZP_00393865.1\| hypothetical protein Bant_01004347 [Bacillus anthracis str. A2012]	0.0	[1..510]	[1..510]
gi\|52141908, gi\|... - gi\|52141908\|ref\|YP_084922.1\| S-layer protein [Bacillus cereus E33L], gi\|51975377\|gb\|AAU16927.1\| S-la...	0.0	[19..510]	[1..492]
gi\|47567919, gi\|... - gi\|47567919\|ref\|ZP_00238626.1\| lipoprotein, putative [Bacillus cereus G9241], gi\|47555397\|gb\|EAL1374...	0.0	[19..510]	[1..492]
gi\|227177127, gi... - gi\|227553745\|ref\|ZP_03983794.1\| S-layer protein [Enterococcus faecalis HH22], gi\|227177127\|gb\|EEI580... gi\|29375013, gi\|... - gi\|29375013\|ref\|NP_814166.1\| hypothetical protein EF0375 [Enterococcus faecalis V583], gi\|29342472\|g... gi\|238857975, gi... - gi\|238857975\|ref\|ZP_04648201.1\| S-layer protein [Enterococcus faecalis TUSoD Ef11], gi\|238829326\|gb\|...	5.0E-75	[232..509]	[43..320]
gi\|190559658, gi... - gi\|190569218\|ref\|ZP_03022114.1\| putative lipoprotein [Bacillus anthracis Tsiankovskii-I], gi\|1905596... gi\|177655398, gi... - gi\|177655398\|ref\|ZP_02936896.1\| putative lipoprotein [Bacillus anthracis str. A0174], gi\|172080149\|g... gi\|227005387, gi... - gi\|227817857\|ref\|YP_002817866.1\| putative lipoprotein [Bacillus anthracis str. CDC 684], gi\|22700538... gi\|228930111, gi... - gi\|228930111\|ref\|ZP_04093121.1\| hypothetical protein bthur0010_47930 [Bacillus thuringiensis serovar... gi\|229599996, gi... - gi\|229599996\|ref\|YP_002869318.1\| putative lipoprotein [Bacillus anthracis str. A0248], gi\|229264404\|... gi\|254686473 - gi\|254686473\|ref\|ZP_05150332.1\| putative lipoprotein [Bacillus anthracis str. CNEVA-9066] gi\|254724472 - gi\|254724472\|ref\|ZP_05186256.1\| putative lipoprotein [Bacillus anthracis str. A1055] gi\|254735680 - gi\|254735680\|ref\|ZP_05193387.1\| putative lipoprotein [Bacillus anthracis str. Western North America ... gi\|254744234 - gi\|254744234\|ref\|ZP_05201914.1\| putative lipoprotein [Bacillus anthracis str. Kruger B] gi\|254750972 - gi\|254750972\|ref\|ZP_05203011.1\| putative lipoprotein [Bacillus anthracis str. Vollum] gi\|254756986 - gi\|254756986\|ref\|ZP_05209014.1\| putative lipoprotein [Bacillus anthracis str. Australia 94] gi\|165869895, gi... - gi\|165869895\|ref\|ZP_02214552.1\| putative lipoprotein [Bacillus anthracis str. A0488], gi\|164714218\|g... gi\|49181863, gi\|... - gi\|49187936\|ref\|YP_031189.1\| putative lipoprotein [Bacillus anthracis str. Sterne], gi\|49181863\|gb\|A... gi\|167641770, gi... - gi\|167641770\|ref\|ZP_02400012.1\| putative lipoprotein [Bacillus anthracis str. A0193], gi\|167510253\|g... gi\|47530635, gi\|... - gi\|47530635\|ref\|YP_021984.1\| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor'], gi\|4750... gi\|167528036, gi... - gi\|167636563\|ref\|ZP_02394858.1\| putative lipoprotein [Bacillus anthracis str. A0442], gi\|167528036\|g... gi\|30259802, gi\|... - gi\|30265125\|ref\|NP_847502.1\| putative lipoprotein [Bacillus anthracis str. Ames], gi\|30259802\|gb\|AAP... gi\|170709091, gi... - gi\|170709091\|ref\|ZP_02899519.1\| putative lipoprotein [Bacillus anthracis str. A0389], gi\|170125993\|g... gi\|21397561, gi\|... - gi\|65317071\|ref\|ZP_00390030.1\| COG1554: Trehalose and maltose hydrolases (possible phosphorylases) [... gi\|170689356, gi... - gi\|170689356\|ref\|ZP_02880549.1\| putative lipoprotein [Bacillus anthracis str. A0465], gi\|170666652\|g...	8.0E-73	[228..509]	[39..320]
gi\|228903589, gi... - gi\|228903589\|ref\|ZP_04067710.1\| hypothetical protein bthur0014_47470 [Bacillus thuringiensis IBL 422... gi\|228969472, gi... - gi\|228969472\|ref\|ZP_04130285.1\| hypothetical protein bthur0004_61490 [Bacillus thuringiensis serovar... gi\|75760065, gi\|... - gi\|75760065\|ref\|ZP_00740129.1\| Hypothetical protein RBTH_06214 [Bacillus thuringiensis serovar israe...	8.0E-72	[229..509]	[40..320]

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Predicted Domain #1

Region A:
Residues: [1-173]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKWCNYLL NEGRDWKTMN KTILKTCIIS AVLGGVLLTE KNGEVKAEEI TPQTNHTGVF  60
   61 KDVPKGHWAY EAIQQLTDEK IVFGYDDGRF GFGDNVTREQ VAALLYRYFN LAEEKNYENP 120
  121 YGDVSEESTS YIKEILSLTE MGVFKGDEHG NFRPKASLTR AEMAQVLTNA FHL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [174-360]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAKSNHTFND VSTNSWASNA ISAVQTNNIA KGVGGGNFAP NMDVTREQYA QFLYNAIQET  60
   61 EKTQETKGQL LASILGETNW QGTKVYDKDH NDVTKENQNF IGLAKYDAKT ARYEFFNAST 120
  121 GESRNDSGTF FITNDGKKRV LISETQNYQA VVELTQLDKE KFTYKRMGKD AKRNDVEVFV 180
  181 EHIPYQE

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [361-460]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KELSFTRPDK NLESSTGKIV TDVDGDKILS STLWNGTVVL DEQGNNVTKY NSNLISLAKY  60
   61 DKNTNKYEFF NVNTGESRGD YGFFDVVHDN KIRAHVSLGN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [461-510]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKYGAVLELT ELNKEKFTYT RMGKDANGKD IKIFVEHEPN TGDLKPNFTK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits