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View Structure Prediction Details

Protein: gi|30263505, gi|...
Organism: Bacillus anthracis str. Ames
Length: 617 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263505, gi|....

Description E-value Query
Range
Subject
Range
CAS1_GLYGL - Cycloartenol synthase OS=Glycyrrhiza glabra GN=GgCAS1 PE=1 SV=1
0.0 [2..617] [88..755]
gi|83016479 - gi|83016479|dbj|BAE53431.1| cycloartenol synthase [Lotus japonicus]
0.0 [2..617] [88..755]
gi|452446 - gi|452446|gb|AAC04931.1| cycloartenol synthase; (S)-2,3-epoxysqualene mutase [Arabidopsis thaliana]
0.0 [2..616] [88..754]
gi|2627181, gi|7... - pir||JC5590 cycloartenol synthase (EC 5.4.99.8) - garden pea, gi|2627181|dbj|BAA23533.1| cycloarten...
0.0 [2..616] [88..754]
CAS2_BETPL - Cycloartenol synthase 2 OS=Betula platyphylla GN=CASBPX2 PE=1 SV=1
0.0 [2..617] [88..755]
CAS1_RICCO - Cycloartenol synthase OS=Ricinus communis PE=1 SV=1
0.0 [2..617] [90..757]
BAMS1_PANGI - Beta-Amyrin Synthase 1 OS=Panax ginseng GN=OSCPNY1 PE=1 SV=1
0.0 [2..615] [91..756]

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Predicted Domain #1
Region A:
Residues: [1-617]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLYEKAHEE IVRRATALQT MQWQDGTWRF CFEGAPLTDC HMIFLLKLLG RDKEIEPFVE  60
   61 RVASLQTNEG TWKLHEDEVG GNLSATIQSY AALLASKKYT KEDANMKRAE NFIQERGGVA 120
  121 RAHFMTKFLL AIHGEYEYPS LFHLPTPIMF LQNDSPFSIF ELSSSARIHL IPMMLCLNKR 180
  181 FRVGKKLLPN LNHIAGGGGE WFREDRSPVF QTLLSDVKQI ISYPLSLHHK GYEEIERFMK 240
  241 ERIDENGTLY SYATASFYMI YALLALGHSL QSSMIQKAIA GITSYIWKME RGNHLQNSPS 300
  301 TVWDTALLSY ALQEAQVSKD NKMIQNATAY LLKKQHTKKA DWSVHAPALT PGGWGFSDVN 360
  361 TTIPDIDDTT AVLRALARSR GNKNIDNAWK KGGNWIKGLQ NNDGGWGAFE KGVTSKLLAK 420
  421 LPIENASDMI TDPSTPDITG RVLEFFGTYA QNELPEKQIQ RAINWLMNVQ EENGSWYGKW 480
  481 GICYLYGTWA VMTGLRSLGI PSSNPSLTRA ASWLEHIQHE DGGWGESCHS SVEKRFVTLP 540
  541 FSTPSQTAWA LDALISYYDT ETPAIRKGVS YLLSNPYVNE RYPTGTGLPG AFYIRYHSYA 600
  601 HIYPLLTLAH YIKKYRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1w6kA
Description: Structure of human OSC in complex with Lanosterol
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lanosterol synthase activity 3.72954210081462 bayes_pls_golite062009
oxidosqualene cyclase activity 3.70516211286781 bayes_pls_golite062009
prenyltransferase activity 3.525366989371 bayes_pls_golite062009
isoprenoid binding 1.59014951619756 bayes_pls_golite062009
protein prenyltransferase activity 0.55742738134604 bayes_pls_golite062009
catalytic activity 0.497699107100544 bayes_pls_golite062009
binding 0.106375195987392 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle