YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49186351, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	479 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49186351, gi|....

Description	E-value	Query Range	Subject Range
gi\|91084087 - gi\|91084087\|ref\|XP_968449.1\| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]	4.0E-76	[2..443]	[10..458]
gi\|114684359 - gi\|114684359\|ref\|XP_531445.2\| PREDICTED: solute carrier family 5 (inositol transporters), member 3 [...	1.0E-74	[1..476]	[5..537]
gi\|73978243 - gi\|73978243\|ref\|XP_539743.2\| PREDICTED: similar to solute carrier family 5 (iodide transporter), mem...	2.0E-71	[4..460]	[209..671]
gi\|109093932 - gi\|109093932\|ref\|XP_001112212.1\| PREDICTED: solute carrier family 5 (sodium/glucose cotransporter), ...	6.0E-70	[2..474]	[25..550]
gi\|89097080, gi\|... - gi\|89097080\|ref\|ZP_01169971.1\| sodium/proline symporter [Bacillus sp. NRRL B-14911], gi\|89088460\|gb\|...	8.0E-70	[1..476]	[41..511]
gi\|45709089, gi\|... - gi\|45709089\|gb\|AAH67621.1\| Solute carrier family 5 (sodium/glucose cotransporter), member 1 [Danio r...	1.0E-69	[2..474]	[25..547]
gi\|2148056 - gi\|2148056\|pir\|\|S59638 glucose transport protein SGLT1, parotid gland - sheep	5.0E-69	[2..474]	[25..550]
gi\|126352558, gi... - gi\|13539197\|emb\|CAC35538.1\| Na+/glucose co-transporter [Equus caballus], gi\|126352558\|ref\|NP_0010753...	1.0E-68	[2..474]	[25..550]
gi\|27807095, gi\|... - gi\|27807095\|ref\|NP_777031.1\| solute carrier family 5 (sodium/glucose cotransporter), member 1 [Bos t...	1.0E-68	[2..474]	[25..550]

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Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWYVIIPMI ISFIVVFLIG VYASRRVQAT APNKFLQEYF LGGRELGGLL LAMTMIATYG  60
   61 SASSFIGGPG IAYNMGLGWV LLSAIQVVTG YIVLTVIGKK FAIIARKMEA ITLIDYLKGR 120
  121 YN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [123-234]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKAVVILSAV CIIIFLFSAT VAQWVGGGRL IESLTGLSYT TALFLFTFSV LVYVLIGGFR  60
   61 AVALSDTLLG IIMLVGTTII LIATVIAGGG IEKIMQELVQ INPNLITPFG AD

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [235-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLTKSYVTS FWILIGIGVV GLPQISVRAM SYKNSKAMHQ ALIIGTIVVG TIMIGMHLTG  60
   61 VFARVVLPGI AVPDKVMPLL AMEVL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [320-479]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPWLAGVFLA APMAAIMSTV NSLLLLVSSS IIKDIYVNYI NKDAADSTIR KGSLWITAIV  60
   61 GLLVYAAAIK PPDFLIWLNL FSFGGLEAAF IWPIVLGLYW RKGNATGALA SILVGVSSYM 120
  121 CIHLFYPNPF GIHTVVFPIC FAFIAYILGS MVAVKKNSIG

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits