YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258103, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	463 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258103, gi|....

Description	E-value	Query Range	Subject Range
gi\|49478981, gi\|... - gi\|49478981\|ref\|YP_037600.1\| glycolate oxidase, GlcD subunit [Bacillus thuringiensis serovar konkuki...	0.0	[1..463]	[1..463]
gi\|51975482, gi\|... - gi\|52142013\|ref\|YP_084816.1\| glycolate oxidase, subunit D [Bacillus cereus E33L], gi\|51975482\|gb\|AAU...	0.0	[1..463]	[1..463]
gi\|47558791, gi\|... - gi\|47564639\|ref\|ZP_00235684.1\| FAD-linked oxidases, C-terminal domain protein [Bacillus cereus G9241...	0.0	[1..462]	[1..462]
gi\|91685822, gi\|... - gi\|91781868\|ref\|YP_557074.1\| putative FAD-binding oxidase [Burkholderia xenovorans LB400], gi\|916858...	0.0	[5..460]	[15..470]
gi\|42782581, gi\|... - gi\|42782581\|ref\|NP_979828.1\| glycolate oxidase, subunit GlcD, putative [Bacillus cereus ATCC 10987],...	0.0	[1..462]	[1..462]
gi\|30021606, gi\|... - gi\|30021606\|ref\|NP_833237.1\| (S)-2-hydroxy-acid oxidase chain D [Bacillus cereus ATCC 14579], gi\|298...	0.0	[1..462]	[1..462]
gi\|113869045, gi... - gi\|113869045\|ref\|YP_727534.1\| D-lactate dehydrogenase (cytochrome) [Ralstonia eutropha H16], gi\|1135...	0.0	[3..457]	[14..468]
gi\|83312084, gi\|... - gi\|83312084\|ref\|YP_422348.1\| FAD/FMN-containing dehydrogenase [Magnetospirillum magneticum AMB-1], g...	0.0	[3..459]	[2..457]
gi\|72119885, gi\|... - gi\|73542472\|ref\|YP_296992.1\| FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [Ralstoni...	0.0	[3..460]	[14..471]
gi\|33600922, gi\|... - gi\|33600922\|ref\|NP_888482.1\| putative oxidoreductase [Bordetella bronchiseptica RB50], gi\|33568522\|e...	0.0	[3..459]	[13..469]

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Predicted Domain #1

Region A:
Residues: [1-463]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITVERLVN GLKGVLPEDR VVINTTVREL HSKDESYHAS SLPDVVVFPK TTEEVSTIMK  60
   61 IASEYGTPVV PFGVGSSLEG HVIPYEKGIT VDFSLMNKIL EIREKDFLVK VQPGVTRSQL 120
  121 NKELKKYGLF FSVDPGADAT LGGMAATNAS GTTAVKYGVM RDQVRDLEVV LADGEVIHTG 180
  181 NLAAKSSSGY HLNGVFVGSE GTLGCFTELT LKVYGIPEHV MAARASFPAI NDAVEAVINI 240
  241 LQAGIPIARI ELVDELSMKQ VNHYSETSYR EEPTLFLEFH GNEAGLKQDV EFTKEIVFDH 300
  301 KCKEVAFETE TAARNKLWDA RHNLAYAYVH SYPGKKLMST DVCVPISELA GAIQQAKETL 360
  361 EKNGLVGGIL GHVGDGNFHV LLMVDPNDKE EVEKADEINE SIVLYALKRG GTCTGEHGVG 420
  421 IGKRKYQEEE HGAALFVMEK IKKALDPQNI LNPNKVFQLK DRS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.522879
Match:	2uuuA
Description:	No description for 2uuuA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits