YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258091, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	314 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258091, gi|....

Description	E-value	Query Range	Subject Range
gi\|49479482, gi\|... - gi\|49479482\|ref\|YP_037592.1\| glycerophosphoryl diester phosphodiesterase [Bacillus thuringiensis ser...	2.0E-84	[1..314]	[1..314]
gi\|229080695, gi... - gi\|229080695\|ref\|ZP_04213214.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus cereus Rock4-2... gi\|29897153, gi\|... - gi\|30021598\|ref\|NP_833229.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus ATCC 14579... gi\|229151681, gi... - gi\|229151681\|ref\|ZP_04279882.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus cereus m1550],... gi\|228637389, gi... - gi\|229146049\|ref\|ZP_04274426.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus cereus BDRD-ST... gi\|229128763, gi... - gi\|229128763\|ref\|ZP_04257740.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus cereus BDRD-Ce...	7.0E-84	[1..314]	[1..314]
gi\|42738491, gi\|... - gi\|42782565\|ref\|NP_979812.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus cereus ...	8.0E-84	[1..314]	[1..314]
gi\|47558780, gi\|... - gi\|47564628\|ref\|ZP_00235673.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus G9241], ...	1.0E-83	[1..314]	[1..314]
gi\|51975496, gi\|... - gi\|52142027\|ref\|YP_084801.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus E33L], gi\|...	2.0E-82	[1..314]	[1..314]
gi\|152975933, gi... - gi\|89202077\|ref\|ZP_01180808.1\| Glycerophosphodiester phosphodiesterase [Bacillus cereus subsp. cytot...	4.0E-82	[1..314]	[1..314]
gi\|221312349 - gi\|221312349\|ref\|ZP_03594154.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis (strain 168) GN=glpQ PE=3 SV=1 GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis GN=glpQ PE=3 SV=1 gi\|221321546 - gi\|221321546\|ref\|ZP_03602840.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... gi\|221317282 - gi\|221317282\|ref\|ZP_03598576.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp...	2.0E-69	[1..312]	[1..291]
gi\|52787931, gi\|... - gi\|52787931\|ref\|YP_093760.1\| GlpQ [Bacillus licheniformis ATCC 14580], gi\|52350433\|gb\|AAU43067.1\| Gl...	3.0E-68	[1..314]	[1..296]
gi\|25487769 - pir\|\|D84112 glycerophosphoryl diester phosphodiesterase glpQ [imported] - Bacillus halodurans (strai... gi\|10176324, gi\|... - gi\|15616262\|ref\|NP_244567.1\| glycerophosphoryl diester phosphodiesterase [Bacillus halodurans C-125]...	8.0E-67	[1..305]	[2..274]
gi\|163940424, gi... - gi\|89208634\|ref\|ZP_01187130.1\| Glycerophosphodiester phosphodiesterase [Bacillus weihenstephanensis ...	1.0E-66	[1..311]	[1..285]

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Predicted Domain #1

Region A:
Residues: [1-314]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIISVLVI FFMTGSIFAG GAVHAKAEGK HEWNKNKFLN IAHRGASGHA PEHTFASYDL  60
   61 VKKMKADYLE LDIQLTKDGQ LIAMHDTAVD RTTNGTGEVR DKTLSEIKSL DAGSWFNKAY 120
  121 PEKAKQEYVG QKVPTLEEIF QKYGRSMKYY IETKSPDVYP GMEEKLLALL EKYNLIGQNM 180
  181 SSSRVMIQSF SKDSLKKIHS INKNIPLVQL LWYYPNENNE IVEWSGITHE PKRVTNDDFQ 240
  241 EIKKYAVGIG PNLRNDNGDL IINESYMKMA RQNGLLIHPY TINEKPDMRL LMKWGATGMF 300
  301 TNYPDRLHTV LKEK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.0
Match:	2oogA
Description:	No description for 2oogA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits