YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258038, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	256 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258038, gi|....

Description	E-value	Query Range	Subject Range
gi\|163941072, gi... - gi\|89209224\|ref\|ZP_01187672.1\| Beta-lactamase [Bacillus weihenstephanensis KBAB4], gi\|89152840\|gb\|EA...	6.0E-49	[2..256]	[3..257]
gi\|206975401, gi... - gi\|206975401\|ref\|ZP_03236314.1\| beta-lactamase II [Bacillus cereus H3081.97], gi\|206746303\|gb\|EDZ576... gi\|217960851, gi... - gi\|217960851\|ref\|YP_002339417.1\| beta-lactamase II [Bacillus cereus AH187], gi\|217064074\|gb\|ACJ78324... gi\|222096906, gi... - gi\|222096906\|ref\|YP_002530963.1\| beta-lactamase II [Bacillus cereus Q1], gi\|221240964\|gb\|ACM13674.1\|... BLAB_BACCE - Metallo-beta-lactamase type 2 OS=Bacillus cereus PE=1 SV=1	2.0E-48	[1..246]	[1..246]
gi\|49329789, gi\|... - gi\|49478233\|ref\|YP_037541.1\| beta-lactamase II [Bacillus thuringiensis serovar konkukian str. 97-27]...	1.0E-47	[1..246]	[1..246]
gi\|38427157 - gi\|38427157\|gb\|AAR20596.1\| beta-lactamase II [Bacillus anthracis]	2.0E-47	[1..246]	[1..246]
gi\|142602, gi\|67774 - gi\|67774\|pir\|\|PNBS2S beta-lactamase (EC 3.5.2.6) II precursor - Bacillus sp, gi\|142602\|gb\|AAA22275.1... BLA2_BAC17 - Metallo-beta-lactamase type 2 OS=Bacillus sp. (strain 170) PE=1 SV=1	2.0E-46	[2..246]	[3..247]
gi\|29897098, gi\|... - gi\|30021543\|ref\|NP_833174.1\| Beta-lactamase, type II [Bacillus cereus ATCC 14579], gi\|29897098\|gb\|AA... gi\|228654909, gi... - gi\|229128716\|ref\|ZP_04257694.1\| Beta-lactamase 2 [Bacillus cereus BDRD-Cer4], gi\|228654909\|gb\|EEL107...	3.0E-46	[2..246]	[10..254]
gi\|47558719, gi\|... - gi\|47564567\|ref\|ZP_00235612.1\| beta-lactamase precursor, type ii [Bacillus cereus G9241], gi\|4755871...	1.0E-45	[2..246]	[3..247]
gi\|42782505, gi\|... - gi\|42782505\|ref\|NP_979752.1\| beta-lactamase II [Bacillus cereus ATCC 10987], gi\|42738431\|gb\|AAS42360...	6.0E-45	[2..242]	[3..243]
gi\|4416230 - gi\|4416230\|gb\|AAD20273.1\| type II beta-lactamase precursor [Chryseobacterium indologenes]	1.0E-41	[1..255]	[1..236]

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Predicted Domain #1

Region A:
Residues: [1-256]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNTLLKLGV CVSLLGITPF VSTISSVQAE RKVEHKVIKN ETGTISISQL NKNVWVHTEL  60
   61 GYFNGEAVPS NGLILNTSKG LVLVDSSWDD KLTKELIEMA EKKFKKSVTD VIITHAHADR 120
  121 IGGIKTLKER GIKAHSTTLT AELAKKNGYE EPLGDLQAIT KLKFGNMKVE TFYPGKGHTE 180
  181 DNIVVWLPQY NMLVGGCLVK SASAKDLGNI TDAYVNEWST SIENVLKRYE NINFVVPGHG 240
  241 EVGDKGLLLH TLDLLK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.0
Match:	2nxaA
Description:	No description for 2nxaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits