YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263354, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	157 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263354, gi|....

Description	E-value	Query Range	Subject Range
gi\|29897053, gi\|... - gi\|30021498\|ref\|NP_833129.1\| 4-oxalocrotonate tautomerase [Bacillus cereus ATCC 14579], gi\|29897053\|...	5.0E-49	[1..157]	[1..157]
gi\|51975608, gi\|... - gi\|52142139\|ref\|YP_084690.1\| 4-oxalocrotonate tautomerase [Bacillus cereus E33L], gi\|51975608\|gb\|AAU...	2.0E-47	[1..157]	[1..157]
gi\|71849042, gi\|... - gi\|71909421\|ref\|YP_287008.1\| 4-oxalocrotonate tautomerase [Dechloromonas aromatica RCB], gi\|71849042...	6.0E-33	[1..146]	[1..130]
gi\|67103541, gi\|... - gi\|67662878\|ref\|ZP_00460164.1\| 4-oxalocrotonate tautomerase [Burkholderia cenocepacia HI2424], gi\|67...	2.0E-30	[1..145]	[32..154]
gi\|78063345, gi\|... - gi\|78063345\|ref\|YP_373253.1\| 4-oxalocrotonate tautomerase [Burkholderia sp. 383], gi\|77971230\|gb\|ABB...	5.0E-30	[1..145]	[1..123]
gi\|84353790 - gi\|84353790\|ref\|ZP_00978714.1\| COG1942: Uncharacterized protein, 4-oxalocrotonate tautomerase homolo...	1.0E-29	[1..145]	[1..123]
gi\|115360096, gi... - gi\|115360096\|ref\|YP_777234.1\| 4-oxalocrotonate tautomerase [Burkholderia ambifaria AMMD], gi\|1152853...	7.0E-29	[1..145]	[1..123]
gi\|17432120 - gi\|17432120\|emb\|CAD18796.1\| putative 4-oxalocrotonate tautomerase protein [Ralstonia solanacearum GM... gi\|17549864 - gi\|17549864\|ref\|NP_523204.1\| hypothetical protein RS02204 [Ralstonia solanacearum GMI1000]	8.0E-28	[1..147]	[1..125]
gi\|91777284, gi\|... - gi\|91777284\|ref\|YP_552492.1\| hypothetical protein Bxe_B2853 [Burkholderia xenovorans LB400], gi\|9168...	9.0E-28	[1..148]	[1..126]
gi\|83650781, gi\|... - gi\|83716956\|ref\|YP_438526.1\| putative tautomerase [Burkholderia thailandensis E264], gi\|83650781\|gb\|...	5.0E-27	[1..145]	[22..144]

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Predicted Domain #1

Region A:
Residues: [1-157]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLIELNTWP TMLTEEKKEF IYNVTELTIK RLKIVPDKIQ VLITELEKEN WGKAGAVASD  60
   61 ATFAEKSRVS NWETKESYDT SDRNVDGMAI IKIDIWNTFD QETKDKWVNE LTQVTSKYTH 120
  121 APLDKVLILI REMIPGNWGQ SGVTGAHADF LSKSRTF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	6.522879
Match:	2aagA
Description:	Crystal Structures of the Wild-type, Mutant-P1A and Inactivated Malonate Semialdehyde Decarboxylase: A Structural Basis for the Decarboxylase and Hydratase Activities
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.20739155013755	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: