YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263219, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	296 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263219, gi|....

Description	E-value	Query Range	Subject Range
gi\|34498329, gi\|... - gi\|34498329\|ref\|NP_902544.1\| L-serine dehydratase [Chromobacterium violaceum ATCC 12472], gi\|3410418...	0.0	[2..278]	[175..455]
gi\|104783406, gi... - gi\|95112393\|emb\|CAK17120.1\| L-serine deaminase I [Pseudomonas entomophila L48], gi\|104783406\|ref\|YP_... gi\|95112393 - gi\|95112393\|emb\|CAK17120.1\| L-serine deaminase I [Pseudomonas entomophila L48]	0.0	[2..278]	[174..454]
gi\|66767582, gi\|... - gi\|66767582\|ref\|YP_242344.1\| L-serine dehydratase [Xanthomonas campestris pv. campestris str. 8004],... gi\|21114049, gi\|... - gi\|21232284\|ref\|NP_638201.1\| L-serine dehydratase [Xanthomonas campestris pv. campestris str. ATCC 3...	0.0	[2..278]	[176..456]
gi\|115585612, gi... - gi\|116050391\|ref\|YP_790792.1\| L-serine dehydratase [Pseudomonas aeruginosa UCBPP-PA14], gi\|115585612...	0.0	[2..278]	[174..454]
gi\|83646576, gi\|... - gi\|83646576\|ref\|YP_435011.1\| L-serine ammonia-lyase [Hahella chejuensis KCTC 2396], gi\|83634619\|gb\|A...	0.0	[2..278]	[175..455]
gi\|32475545, gi\|... - gi\|32475545\|ref\|NP_868539.1\| L-serine dehydratase [Rhodopirellula baltica SH 1], gi\|32446087\|emb\|CAD...	0.0	[2..278]	[216..496]
gi\|11350539 - pir\|\|B83341 L-serine dehydratase PA2443 [imported] - Pseudomonas aeruginosa (strain PAO1) gi\|9948490, gi\|1... - gi\|9948490\|gb\|AAG05831.1\|AE004671_7 L-serine dehydratase [Pseudomonas aeruginosa PAO1], gi\|15597639\|... gi\|126194257, gi... - gi\|254240879\|ref\|ZP_04934201.1\| L-serine dehydratase [Pseudomonas aeruginosa 2192], gi\|194551864\|ref...	0.0	[2..278]	[174..454]
gi\|36786019, gi\|... - gi\|37526587\|ref\|NP_929931.1\| L-serine dehydratase 1 (SDH 1) [Photorhabdus luminescens subsp. laumond...	0.0	[2..277]	[171..449]
gi\|122879137, gi... - gi\|77760644\|ref\|YP_200460.2\| L-serine dehydratase [Xanthomonas oryzae pv. oryzae KACC10331], gi\|1228... gi\|84367316, gi\|... - gi\|84623376\|ref\|YP_450748.1\| L-serine dehydratase [Xanthomonas oryzae pv. oryzae MAFF 311018], gi\|84... gi\|166712863 - gi\|166712863\|ref\|ZP_02244070.1\| L-serine dehydratase [Xanthomonas oryzae pv. oryzicola BLS256]	0.0	[2..278]	[176..456]

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Predicted Domain #1

Region A:
Residues: [1-296]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYMAIKEIVD AANKSQKTIY ELAIEQEIEQ TKTSYEEVWS KMEQNLATMQ NAINKSIEGD  60
   61 GVFSPTGLTG GDAVKIKNYR ENRKTLSGDL MVLGIQSAIG VNEVNAALGA ICATPTAGAS 120
  121 GTIPGVLFSI KDTLQLSHED MIHFLFTSAL FGTIVANNAC ISGAYGGCQA EIGSASAMAA 180
  181 AAAVEAAGGT PQQSSEAFSI ALQNLLGLVC DPVAGLVEIP CVKRNAIGTA NALAAGDIAL 240
  241 AGVNNIINAD EVIEAMYRIG RQMPRELRET GLGGIAATPT GIAIKNKIFG EKQSNQ

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.02
Match:	2hp0A
Description:	No description for 2hp0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits