YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263186, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	207 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263186, gi|....

Description	E-value	Query Range	Subject Range
gi\|42782330, gi\|... - gi\|42782330\|ref\|NP_979577.1\| protease synthase and sporulation negative regulatory protein PAI 2 [Ba...	3.0E-66	[1..207]	[1..207]
PAIB_BACSU - Protease synthase and sporulation protein PAI 2 OS=Bacillus subtilis GN=paiB PE=1 SV=3 PAIB_BACSU - Protease synthase and sporulation protein PAI 2 OS=Bacillus subtilis (strain 168) GN=paiB PE=1 SV=3	2.0E-65	[1..207]	[1..207]
gi\|51975758, gi\|... - gi\|52142289\|ref\|YP_084540.1\| protease synthase and sporulation negative regulatory protein PAI 2 [Ba...	8.0E-65	[1..207]	[1..207]
gi\|2635711, gi\|1... - gi\|2635711\|emb\|CAB15204.1\| transcriptional regulator [Bacillus subtilis subsp. subtilis str. 168], g... PAIB_BACSU - Protease synthase and sporulation protein PAI 2 OS=Bacillus subtilis GN=paiB PE=1 SV=2	5.0E-64	[1..207]	[1..207]
gi\|65320514, gi\|... - gi\|65320514\|ref\|ZP_00393473.1\| COG2808: Transcriptional regulator [Bacillus anthracis str. A2012], r...	4.0E-63	[1..207]	[1..207]
gi\|52784396, gi\|... - gi\|52784396\|ref\|YP_090225.1\| PaiB [Bacillus licheniformis ATCC 14580], gi\|52346898\|gb\|AAU39532.1\| Pa...	2.0E-61	[1..205]	[1..205]
gi\|77385857, gi\|... - gi\|77461854\|ref\|YP_351361.1\| negative transcriptional regulator [Pseudomonas fluorescens Pf0-1], gi\|...	6.0E-60	[1..200]	[11..217]
gi\|71555902, gi\|... - gi\|71735349\|ref\|YP_277216.1\| transcriptional regulator [Pseudomonas syringae pv. phaseolicola 1448A]...	2.0E-58	[1..199]	[27..232]
gi\|28855866, gi\|... - gi\|28872610\|ref\|NP_795229.1\| transcriptional regulator, putative [Pseudomonas syringae pv. tomato st... tr\|Q87U10\|Q87U10... - Transcriptional regulator, putative OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_5505...	5.0E-58	[1..199]	[1..206]
gi\|63258988, gi\|... - gi\|66048281\|ref\|YP_238122.1\| negative transcriptional regulator [Pseudomonas syringae pv. syringae B...	5.0E-57	[1..199]	[1..206]

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Predicted Domain #1

Region A:
Residues: [1-207]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIPKYFKVT NVDEIWGFVQ KNSFGTIVTT KKEKPIATHL PFGLTKQGDD YFITGHMAYG  60
   61 NPQWRTFETC ENVLVMLQGP HSYISSSWYE NEEVPTWNYQ AVHIYGKASI LDKEELIDEL 120
  121 TTMLKKYEEH RENSVLWDKL SPTLLENELK GIVGFKIKVG DIQAAYKLSQ NRNETDYINI 180
  181 IEKLYDEENP DAKQMAELMG SRLNNHI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.39794
Match:	2ol5A
Description:	No description for 2ol5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits