YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257808, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	329 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257808, gi|....

Description	E-value	Query Range	Subject Range
FABH_CALS8 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 434...	2.0E-77	[1..329]	[1..327]
FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum GN=fabH PE=3 SV=1 FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792...	4.0E-77	[1..329]	[1..323]
gi\|148263932, gi... - gi\|88936058\|ref\|ZP_01141677.1\| Beta-ketoacyl-acyl carrier protein synthase III (FabH) [Geobacter ura...	1.0E-75	[4..329]	[3..326]
gi\|39983582, gi\|... - gi\|39996701\|ref\|NP_952652.1\| 3-oxoacyl-(acyl-carrier-protein) synthase III [Geobacter sulfurreducens...	3.0E-75	[4..329]	[2..325]
gi\|221564990, gi... - gi\|222055701\|ref\|YP_002538063.1\| 3-oxoacyl-(acyl-carrier-protein) synthase III [Geobacter sp. FRC-32...	5.0E-75	[4..329]	[3..326]
FABH_CLOPS - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain SM101 / Type A) GN=fa...	8.0E-75	[4..328]	[3..323]
gi\|78194064, gi\|... - gi\|78222809\|ref\|YP_384556.1\| 3-oxoacyl-[acyl-carrier-protein] synthase III [Geobacter metallireducen...	8.0E-75	[4..329]	[3..326]
FABH_AQUAE - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Aquifex aeolicus GN=fabH PE=1 SV=1 FABH_AQUAE - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Aquifex aeolicus (strain VF5) GN=fabH PE=1 SV=1	1.0E-74	[6..329]	[4..309]
FABH_CLOP1 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 ...	2.0E-74	[3..328]	[2..323]
gi\|166856536, gi... - gi\|76797521\|ref\|ZP_00779827.1\| Beta-ketoacyl-acyl carrier protein synthase III (FabH) [Thermoanaerob...	4.0E-74	[5..329]	[7..329]

Back

Predicted Domain #1

Region A:
Residues: [1-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRYISIKGI GTYLPKRKVD SLEIDQMLDV PEGWTLKKAG VKTRYFVDGE TSSYMGAEAA  60
   61 KKAVEDAKLT WDDIDCIICG SGTIQQAIPS TASLIQEQLG LQHSGIPCFD INSTCLSFIT 120
  121 ALDTISYAIE CGRYKNVVII SSEISSVGLN WGQNESSILF GDGAAAVVIT KGDHSSSIIA 180
  181 SHMETYSSGA HLSEIRGGGT MIHPREYSEE RKEDFLFDMN GRAIFKLSSK YLMKFIDKLL 240
  241 MDTGYSLADI DLIVPHQASG PAMRLIRKKL GVDEERFMTI FEDYGNMISA SIPVALFEAI 300
  301 KQKKVQRGNK ILLLGTSAGL SIGGILLEY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.221849
Match:	2ebdA
Description:	No description for 2ebdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits