YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49179904, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	346 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49179904, gi|....

Description	E-value	Query Range	Subject Range
gi\|71155563, gi\|... - gi\|71368737\|ref\|ZP_00659224.1\| Arsenical-resistance protein ACR3 [Nocardioides sp. JS614], gi\|711555...	7.0E-76	[3..340]	[237..574]
gi\|148568161, gi... - gi\|148656051\|ref\|YP_001276256.1\| arsenical-resistance protein [Roseiflexus sp. RS-1], gi\|148568161\|g...	3.0E-74	[2..345]	[17..360]
gi\|56419123, gi\|... - gi\|56419123\|ref\|YP_146441.1\| arsenic oxyanion-translocation pump [Geobacillus kaustophilus HTA426], ...	1.0E-72	[2..346]	[7..351]
gi\|75763844, gi\|... - gi\|75763844\|ref\|ZP_00743494.1\| Arsenical-resistance protein ACR3 [Bacillus thuringiensis serovar isr... gi\|228901679, gi... - gi\|228901679\|ref\|ZP_04065853.1\| Arsenite resistance protein arsB [Bacillus thuringiensis IBL 4222], ...	3.0E-72	[1..346]	[5..350]
gi\|163863047, gi... - gi\|89205828\|ref\|ZP_01184394.1\| Arsenical-resistance protein ACR3 [Bacillus weihenstephanensis KBAB4]...	4.0E-72	[1..346]	[1..346]
gi\|5802942 - gi\|5802942\|gb\|AAD51846.1\|AF178758_2 ArsB [Bacillus sp. CDB3] gi\|5802942 - gi\|5802942\|gb\|AAD51846.1\| ArsB [Bacillus sp. CDB3]	9.0E-72	[2..345]	[7..350]
gi\|30021263, gi\|... - gi\|30021263\|ref\|NP_832894.1\| arsenical-resistance protein ACR3 [Bacillus cereus ATCC 14579], gi\|2989...	2.0E-71	[1..346]	[1..346]
gi\|42782263, gi\|... - gi\|42782263\|ref\|NP_979510.1\| arsenite efflux transporter ArsB [Bacillus cereus ATCC 10987], gi\|42738...	2.0E-71	[1..346]	[1..346]
gi\|49480092, gi\|... - gi\|49480092\|ref\|YP_037287.1\| arsenical-resistance protein [Bacillus thuringiensis serovar konkukian ...	4.0E-71	[1..346]	[1..346]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLSFLDRY LTLWIFLAMA VGIGLGFVFP SVVDGLNTLQ VGTTSIPLAV GLIVMMYPPL  60
   61 AKVRYEEMGR VFKDVKVLVL SLVQNWIIGP VLMFVLAIIF LPDKPEYMVG LIMIGLARCI 120
  121 AMVIVWNDLA DGDKEYAAGL VAFNSVFQML FFSVYAYVFV TVIPEWLGIE GAIVDITMIE 180
  181 VAKSVFIYLG IPFIAGMLTR FVLVKLKGRQ WYEKVFIPKI SPLTLIALLF TIIIMFSLKG 240
  241 EMIVSVP

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	86.207608
Match:	PF01758.7
Description:	No description for PF01758.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [248-346]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDVVRIAIPL LIYFIVMFFV SFFMGRKIGA NYPVTTTLAF TAGSNNFELA IAVAVGVFGI  60
   61 HSGAAFAAVI GPLVEVPVMI ALVNVAFWFK RKYFNDQLV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits