YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49185917, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	70 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49185917, gi|....

Description	E-value	Query Range	Subject Range
SAS2_BACME - Small, acid-soluble spore protein C2 OS=Bacillus megaterium GN=SASP-C2 PE=3 SV=1	107.0	[0..1]	[70..1]
gi\|52142406, gi\|... - gi\|52142406\|ref\|YP_084421.1\| small, acid-soluble spore protein [Bacillus cereus E33L], gi\|51975875\|g...	105.0	[0..1]	[70..1]
gi\|42782199, gi\|... - gi\|42782199\|ref\|NP_979446.1\| small, acid-soluble spore protein [Bacillus cereus ATCC 10987], gi\|4273... gi\|228793625, gi... - gi\|228966067\|ref\|ZP_04127131.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228921801, gi... - gi\|228921801\|ref\|ZP_04085116.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228908868, gi... - gi\|228908868\|ref\|ZP_04072699.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis IBL 200]...	103.0	[0..1]	[70..1]
gi\|56911410, gi\|... - gi\|56965166\|ref\|YP_176898.1\| small acid-soluble spore protein [Bacillus clausii KSM-K16], gi\|5691141...	103.0	[0..3]	[67..1]
gi\|218545205, gi... - gi\|218898180\|ref\|YP_002446591.1\| small, acid-soluble spore protein [Bacillus cereus G9842], gi\|21854... gi\|74487705, gi\|... - gi\|75764808\|ref\|ZP_00744191.1\| Small acid-soluble spore protein [Bacillus thuringiensis serovar isra... gi\|228901634, gi... - gi\|228901634\|ref\|ZP_04065811.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis IBL 4222...	103.0	[0..1]	[70..1]
gi\|229199626, gi... - gi\|229199626\|ref\|ZP_04326280.1\| Small, acid-soluble spore protein B [Bacillus cereus m1293], gi\|2285... gi\|228773570, gi... - gi\|228986189\|ref\|ZP_04146331.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|47558401, gi\|... - gi\|47564249\|ref\|ZP_00235294.1\| small acid-soluble spore protein 1-related protein [Bacillus cereus G...	103.0	[0..1]	[70..1]
gi\|118477439, gi... - gi\|118477439\|ref\|YP_894590.1\| small, acid-soluble spore protein [Bacillus thuringiensis str. Al Haka... gi\|51976904, gi\|... - gi\|52143435\|ref\|YP_083396.1\| small acid-soluble spore protein [Bacillus cereus E33L], gi\|51976904\|gb... gi\|49178783, gi\|... - gi\|49184856\|ref\|YP_028108.1\| small acid-soluble spore protein alpha/beta family protein [Bacillus an... gi\|49332763, gi\|... - gi\|49481207\|ref\|YP_036150.1\| small acid-soluble spore protein [Bacillus thuringiensis serovar konkuk... gi\|30020123, gi\|... - gi\|30020123\|ref\|NP_831754.1\| small acid-soluble spore protein [Bacillus cereus ATCC 14579], gi\|29895...	102.0	[0..1]	[70..1]
gi\|3688809 - gi\|3688809\|gb\|AAC62407.1\| SspA [Bacillus firmus]	102.0	[0..3]	[66..1]

Back

Predicted Domain #1

Region A:
Residues: [1-70]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNNSGSRN ELLVRGAEQA LDQMKYEIAQ EFGVQLGADT TARSNGSVGG EITKRLVAMA  60
   61 EQQLGGRANR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	37.366532
Match:	PF00269.11
Description:	No description for PF00269.11 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.947	N/A	N/A	a.77.1	DEATH domain
View	Download	0.792	N/A	N/A	d.57.1	DNA damage-inducible protein DinI
View	Download	0.771	N/A	N/A	d.57.1	DNA damage-inducible protein DinI
View	Download	0.727	N/A	N/A	d.58.11	EF-G/eEF-2 domains III and V
View	Download	0.719	N/A	N/A	d.58.11	EF-G/eEF-2 domains III and V
View	Download	0.670	N/A	N/A	d.58.11	EF-G/eEF-2 domains III and V
View	Download	0.597	N/A	N/A	d.51.1	Eukaryotic type KH-domain (KH-domain type I)
View	Download	0.586	N/A	N/A	a.35.1	lambda repressor-like DNA-binding domains
View	Download	0.568	N/A	N/A	d.57.1	DNA damage-inducible protein DinI
View	Download	0.563	N/A	N/A	d.51.1	Eukaryotic type KH-domain (KH-domain type I)
View	Download	0.553	N/A	N/A	d.58.11	EF-G/eEF-2 domains III and V
View	Download	0.505	N/A	N/A	d.74.1	Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View	Download	0.453	N/A	N/A	d.51.1	Eukaryotic type KH-domain (KH-domain type I)
View	Download	0.451	N/A	N/A	d.51.1	Eukaryotic type KH-domain (KH-domain type I)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits