YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257616, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	405 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257616, gi|....

Description	E-value	Query Range	Subject Range
ARGD_METJA - Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1 ARGD_METJA - Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JA...	4.0E-98	[2..401]	[4..398]
gi\|84488867, gi\|... - gi\|84488867\|ref\|YP_447099.1\| acetylornithine aminotransferase [Methanosphaera stadtmanae DSM 3091], ...	9.0E-98	[2..396]	[4..387]
gi\|110601528, gi... - gi\|222054221\|ref\|YP_002536583.1\| acetylornithine and succinylornithine aminotransferase [Geobacter s...	3.0E-97	[3..399]	[5..396]
gi\|77994848, gi\|... - gi\|78042733\|ref\|YP_361071.1\| acetylornithine aminotransferase [Carboxydothermus hydrogenoformans Z-2...	4.0E-97	[3..399]	[5..392]
ARGD_THETN - Acetylornithine aminotransferase OS=Thermoanaerobacter tengcongensis GN=argD PE=3 SV=1 ARGD_CALS4 - Acetylornithine aminotransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 1...	4.0E-97	[8..400]	[5..392]
gi\|134298152, gi... - gi\|88944090\|ref\|ZP_01147423.1\| Acetylornithine and succinylornithine aminotransferase [Desulfotomacu...	5.0E-97	[3..396]	[5..393]
gi\|88917343, gi\|... - gi\|88935900\|ref\|ZP_01141523.1\| Acetylornithine and succinylornithine aminotransferase [Geobacter ura...	7.0E-97	[2..399]	[4..396]
gi\|167039319, gi... - gi\|167039319\|ref\|YP_001662304.1\| acetylornithine and succinylornithine aminotransferase [Thermoanaer... gi\|242256153, gi... - gi\|242256153\|ref\|ZP_04801049.1\| acetylornithine and succinylornithine aminotransferase [Thermoanaero...	9.0E-96	[8..399]	[6..392]
gi\|116696578, gi... - gi\|71546438\|ref\|ZP_00667239.1\| Acetylornithine and succinylornithine aminotransferase [Syntrophobact...	1.0E-95	[1..398]	[1..393]
gi\|241883989, gi... - gi\|241903682\|ref\|ZP_04788402.1\| acetylornithine and succinylornithine aminotransferase [Thermoanaero... gi\|76588469, gi\|... - gi\|76796199\|ref\|ZP_00778566.1\| Acetylornithine and succinylornithine aminotransferase [Thermoanaerob...	2.0E-95	[8..399]	[6..392]

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Predicted Domain #1

Region A:
Residues: [1-405]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDWFQLDKE YMMSTYCRTK IAIERGEGCK LYDVDGKEYL DLFSGVGVNV LGYNHPKIVQ  60
   61 TTMDQVTKSL HLPFHFLNPV AIEYAKKLVD CSLKNGKVFF TNSGTEATET TLKLIDKYRA 120
  121 ITNEEREGIV VLKNSFHGRT LGALHFTRQE SVYQNFPTTS IPVYEVEREN IEQLEETIIN 180
  181 ENPIAILLEP VLGSGGIYPL SREYLHGVQN LCDKYNVILI VDEVQSGMGR TGKLFAYQNF 240
  241 NITPHIIQIG KGAGGGIPLG GIIVGEKLCD VFAPGDHGTT FAHSSMGTAL GLTVLNTLLD 300
  301 DGLMQEAYEM SLYLNDKLQE IQKENSYYIE EVRHAGMMFG ISLNDTNENV KKLQVELMEK 360
  361 GILVDVTQGN IIRLLPPYII TKEEIDTFIT QFIFCIDKVA AVVSA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	95.69897
Match:	2e54A
Description:	No description for 2e54A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits