YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262976, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	498 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262976, gi|....

Description	E-value	Query Range	Subject Range
gi\|152024339, gi... - gi\|89201988\|ref\|ZP_01180720.1\| Glycosyl transferase, family 2 [Bacillus cereus subsp. cytotoxis NVH ...	2.0E-56	[1..496]	[1..513]
gi\|49480124, gi\|... - gi\|49480124\|ref\|YP_034773.1\| glycosyltransferase, involved in cell wall biogenesis [Bacillus thuring...	2.0E-53	[1..489]	[1..499]
gi\|51978270, gi\|... - gi\|52144801\|ref\|YP_082028.1\| glycosyltransferase, involved in cell wall biogenesis [Bacillus cereus ...	6.0E-53	[1..489]	[1..499]
gi\|163938435, gi... - gi\|89204659\|ref\|ZP_01183235.1\| Glycosyl transferase, family 2 [Bacillus weihenstephanensis KBAB4], g...	7.0E-53	[4..497]	[3..505]
gi\|42735558, gi\|... - gi\|42779642\|ref\|NP_976889.1\| glycosyl transferase, group 2 family protein [Bacillus cereus ATCC 1098...	9.0E-53	[1..492]	[1..502]
gi\|49183508, gi\|... - gi\|49183508\|ref\|YP_026760.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str. S...	1.0E-52	[1..489]	[1..499]
gi\|165870712, gi... - gi\|165870712\|ref\|ZP_02215365.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|167634820, gi... - gi\|167634820\|ref\|ZP_02393139.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|167511188, gi... - gi\|167640794\|ref\|ZP_02399053.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|47525778, gi\|... - gi\|47525778\|ref\|YP_017127.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str. '... gi\|170688623, gi... - gi\|170688623\|ref\|ZP_02879829.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|30260667, gi\|... - gi\|30260667\|ref\|NP_843044.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str. A... gi\|170707155, gi... - gi\|170707155\|ref\|ZP_02897611.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|21398454, gi\|... - gi\|65317926\|ref\|ZP_00390885.1\| COG0463: Glycosyltransferases involved in cell wall biogenesis [Bacil... gi\|177655147, gi... - gi\|177655147\|ref\|ZP_02936777.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254762097 - gi\|254762097\|ref\|ZP_05213946.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254756278 - gi\|254756278\|ref\|ZP_05208307.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254743739 - gi\|254743739\|ref\|ZP_05201424.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254738877 - gi\|254738877\|ref\|ZP_05196579.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|254686896 - gi\|254686896\|ref\|ZP_05150754.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis str... gi\|229266564, gi... - gi\|229602156\|ref\|YP_002865111.1\| glycosyl transferase, group 2 family [Bacillus anthracis str. A0248... gi\|227816620, gi... - gi\|227816620\|ref\|YP_002816629.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis st... gi\|190568187, gi... - gi\|190568187\|ref\|ZP_03021096.1\| glycosyl transferase, group 2 family protein [Bacillus anthracis Tsi...	2.0E-52	[4..489]	[3..495]
gi\|47567275, gi\|... - gi\|47567275\|ref\|ZP_00237989.1\| glycosyltransferase involved in cell wall biogenesis [Bacillus cereus...	5.0E-52	[4..492]	[3..498]
gi\|29894236, gi\|... - gi\|30018695\|ref\|NP_830326.1\| cell wall biosynthesis glycosyltransferase [Bacillus cereus ATCC 14579]...	9.0E-52	[1..497]	[1..509]
gi\|74492270, gi\|... - gi\|75760244\|ref\|ZP_00740298.1\| Glycosyltransferase / Glycosyltransferase [Bacillus thuringiensis se...	2.0E-51	[1..497]	[1..509]

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Predicted Domain #1

Region A:
Residues: [1-276]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCKNPISIII RIQHNIRVLP EILKACEQLQ PLEIILTING YIDDSIDIAK SYNCKIIKLE  60
   61 KPTEPNNCYV IGAKKAKGKS LLFLDANYII HPSLLIPFLQ PLLDESADVV LNNLDDFFYQ 120
  121 KQKPTIEMIW QQVTNHFFHR PDLNINSLLF PPYAITKETL EAINPESLLN PILAQMKIIK 180
  181 NKFRISNHFK IAIPQIPSFS SKQLNCYHLE AIENWVNILQ DPRGNYTDNN RRRDIILELQ 240
  241 NGEQRAIPKI ITGKEFYSNT YGNKQLSIII PVQNEE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.154902
Match:	2ffuA
Description:	Crystal Structure of Human ppGalNAcT-2 complexed with UDP and EA2
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [277-498]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTIESIIFEV QKLKPLEIIL IVNGSTDKTE ELAKNCGATV ITYKEVLGID TGRAVGAYFA  60
   61 KGDILLFIDG DFLIPSSDLL PFVQSVQNGT DLALNKLEHY YMYRLPYTIV TACKYAVNLA 120
  121 CNRKDLGMGS TTAVPHAFSR KCIDTIGFHS LLSPTLSQVK TILAGLHVQK VHSVDVDKIN 180
  181 RVRPEKHFSK EGYLSLATQQ IIGDHIEAIY YIAEQKRGTE CF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.522879
Match:	2d7iA
Description:	No description for 2d7iA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits