YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257540, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	541 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257540, gi|....

Description	E-value	Query Range	Subject Range
gi\|98659782, gi\|... - gi\|98659782\|dbj\|GAA02846.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476778...	6.0E-96	[1..533]	[1..539]
gi\|48785352, gi\|... - gi\|91780211\|ref\|YP_555418.1\| peptide/opine/nickel ABC transporter ATPase [Burkholderia xenovorans LB...	3.0E-95	[1..538]	[14..567]
gi\|48855897 - gi\|48855897\|ref\|ZP_00310055.1\| COG1123: ATPase components of various ABC-type transport systems, con... gi\|110636885, gi... - gi\|110636885\|ref\|YP_677092.1\| ABC transporter, ATP-binding protein [Cytophaga hutchinsonii ATCC 3340...	8.0E-95	[1..538]	[13..588]
gi\|159141426, gi... - gi\|17938412\|ref\|NP_535201.1\| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumef... gi\|25384667 - pir\|\|AG3137 hypothetical protein moaD [imported] - Agrobacterium tumefaciens (strain C58, Dupont)	5.0E-94	[1..537]	[6..553]
gi\|75911189, gi\|... - gi\|75911189\|ref\|YP_325485.1\| ABC transporter-like [Anabaena variabilis ATCC 29413], gi\|75704914\|gb\|A...	7.0E-94	[1..534]	[5..538]
gi\|115258954, gi... - gi\|116254306\|ref\|YP_770144.1\| putative ATP-binding component of ABC transporter [Rhizobium leguminos...	8.0E-94	[1..537]	[12..559]
gi\|42782044, gi\|... - gi\|42782044\|ref\|NP_979291.1\| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987], gi\|4... gi\|118417500, gi... - gi\|118478275\|ref\|YP_895426.1\| ABC transporter, ATP-binding protein [Bacillus thuringiensis str. Al H... gi\|228586346, gi... - gi\|229197121\|ref\|ZP_04323857.1\| ABC transporter, ATP-binding protein [Bacillus cereus m1293], gi\|228... gi\|228598322, gi... - gi\|229185152\|ref\|ZP_04312339.1\| ABC transporter, ATP-binding protein [Bacillus cereus BGSC 6E1], gi\|...	1.0E-93	[1..541]	[1..541]
gi\|49610471, gi\|... - gi\|50119945\|ref\|YP_049112.1\| ABC transporter, ATP-binding protein [Pectobacterium atrosepticum SCRI1...	1.0E-93	[1..537]	[4..551]
gi\|39573949, gi\|... - gi\|42522753\|ref\|NP_968133.1\| ABC-type dipeptide transport system, ATPase component [Bdellovibrio bac...	2.0E-93	[1..537]	[6..556]

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Predicted Domain #1

Region A:
Residues: [1-541]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITVSNVSLR FADRKLFEGV NIKFTPGNCY GLIGANGAGK STFLKILSGE IEPSTGDIHI  60
   61 TPGERLAVLK QNHFEYEEFP VLETVIMGHT QLYKVMQEKN AIYMKEDFSD EDGMRAAELE 120
  121 GEFAELNGWE AESEAAILLK GLGIGEDLHD KKLSELTGAE KVKVLLAQAL FGKPDILLLD 180
  181 EPTNHLDLKA IQWLENFLMN FENTVIVVSH DRHFLNKVCT HMADLDFGKI QLYVGNYDFW 240
  241 HESSQLALKL TQDANKKKEE KVKELQNFIA RFSSNASKAK QATSRKKLLD KITLDDIRPS 300
  301 SRRYPFVGFT PEREVGNDLL TVEGLSKTID GEKVLDNVYF TLNKGDKVAF IGRNDIAMTT 360
  361 LFKILMGEME PDSGSFKWGV TTSQSYFPRD NSKYFENSDL NLVEWLRQFS PQDESESFLR 420
  421 GFLGRMLFSG EEVKKNVSVL SGGEKVRCML SKMMLSGANV ITLDDPTNHL DLESITALNN 480
  481 GLIAFKGTML FTSHDHQFVQ TIANRIIEVT PNGVIDKEAT YDEFLENEEL QKQVDAMYKG 540
  541 Q

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.045757
Match:	1yqtA
Description:	RNase-L Inhibitor
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits