YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262880, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	328 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262880, gi|....

Description	E-value	Query Range	Subject Range
gi\|65320195, gi\|... - gi\|65320195\|ref\|ZP_00393154.1\| COG0715: ABC-type nitrate/sulfonate/bicarbonate transport systems, pe...	2.0E-64	[1..328]	[1..328]
gi\|42737940, gi\|... - gi\|42782016\|ref\|NP_979263.1\| sulfonate ABC transporter, sulfonate-binding protein, putative [Bacillu...	8.0E-64	[1..327]	[1..327]
gi\|49330624, gi\|... - gi\|49479068\|ref\|YP_036988.1\| alkanesulfonates-binding protein [Bacillus thuringiensis serovar konkuk...	2.0E-63	[1..327]	[1..327]
gi\|228965856, gi... - gi\|228965856\|ref\|ZP_04126930.1\| aliphatic sulfonates-binding protein [Bacillus thuringiensis serovar... gi\|228858163, gi... - gi\|228901455\|ref\|ZP_04065640.1\| aliphatic sulfonates-binding protein [Bacillus thuringiensis IBL 422... gi\|75762928, gi\|... - gi\|75762928\|ref\|ZP_00742733.1\| Alkanesulfonates-binding protein [Bacillus thuringiensis serovar isra... gi\|218897994, gi... - gi\|218897994\|ref\|YP_002446405.1\| putative sulfonate ABC transporter, sulfonate-binding protein [Baci...	3.0E-63	[1..327]	[1..327]
gi\|52142602, gi\|... - gi\|52142602\|ref\|YP_084228.1\| alkanesulfonates-binding protein [Bacillus cereus E33L], gi\|51976071\|gb...	3.0E-63	[1..327]	[1..327]
gi\|47553215, gi\|... - gi\|47570099\|ref\|ZP_00240757.1\| sulfonate ABC transporter, periplasmic sulfonate-binding protein, put...	5.0E-63	[1..327]	[1..327]
gi\|229128257, gi... - gi\|229128257\|ref\|ZP_04257238.1\| aliphatic sulfonates-binding protein [Bacillus cereus BDRD-Cer4], gi... gi\|29896581, gi\|... - gi\|30021028\|ref\|NP_832659.1\| alkanesulfonates-binding protein [Bacillus cereus ATCC 14579], gi\|29896...	6.0E-62	[1..327]	[1..327]
gi\|152024503, gi... - gi\|89202615\|ref\|ZP_01181330.1\| ABC transporter, substrate-binding protein, aliphatic sulphonates [Ba...	6.0E-57	[21..327]	[22..330]
SSUA_BACSU - Putative aliphatic sulfonates-binding protein OS=Bacillus subtilis GN=ssuA PE=2 SV=1 gi\|221313045 - gi\|221313045\|ref\|ZP_03594850.1\| aliphatic sulfonate ABC transporter (binding lipoprotein) [Bacillus ... gi\|221317970 - gi\|221317970\|ref\|ZP_03599264.1\| aliphatic sulfonate ABC transporter (binding lipoprotein) [Bacillus ... gi\|221322244 - gi\|221322244\|ref\|ZP_03603538.1\| aliphatic sulfonate ABC transporter (binding lipoprotein) [Bacillus ... SSUA_BACSU - Putative aliphatic sulfonates-binding protein OS=Bacillus subtilis (strain 168) GN=ssuA PE=2 SV=1	9.0E-57	[1..326]	[1..324]
gi\|75910352, gi\|... - gi\|75910352\|ref\|YP_324648.1\| ABC transporter, substrate-binding protein, aliphatic sulphonates [Anab...	4.0E-54	[3..315]	[34..352]

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Predicted Domain #1

Region A:
Residues: [1-328]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKKFKVLSF TLAISLFLFG CEKSTASSKK EDVTVQIGIQ QGLSPLLLAQ KKGWFEEEFK  60
   61 KEGVKVKWTE FQSGPPYFEA IASNRLDFGE VGNSPVISAQ AAGIGFTEIA NTSYARKGTG 120
  121 ILVQKDSKIT SIKELKGKKI AVAKGSSAFN LLYRALDKEG INAKDVNVIQ LQPDEAQPAF 180
  181 ESGSVDAWAI WDPFISLHTV NKGAKVITDG ERLNVSSPEF LIARTKFAKE HPELVEKFLK 240
  241 VYEKARVWQD ENLDEAIKIY TSAKKIDAEI VKEVFNHDKP ILVPVTKEIV AEQQQTADFQ 300
  301 YKLGSIKKEI KTDKVVDNSF VEKALKAN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.522879
Match:	2g29A
Description:	No description for 2g29A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits