YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257486, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	258 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257486, gi|....

Description	E-value	Query Range	Subject Range
gi\|228660993, gi... - gi\|229122432\|ref\|ZP_04251645.1\| Methyltransferase type 11 [Bacillus cereus 95/8201], gi\|228660993\|gb... gi\|228927937, gi... - gi\|228927937\|ref\|ZP_04090982.1\| Methyltransferase type 11 [Bacillus thuringiensis serovar pondicheri... gi\|49329449, gi\|... - gi\|49477893\|ref\|YP_036968.1\| methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27]...	8.0E-48	[1..257]	[1..257]
gi\|51976090, gi\|... - gi\|52142621\|ref\|YP_084208.1\| methyltransferase [Bacillus cereus E33L], gi\|51976090\|gb\|AAU17640.1\| me...	1.0E-47	[1..255]	[1..255]
gi\|30021008, gi\|... - gi\|30021008\|ref\|NP_832639.1\| SAM-dependent methyltransferase [Bacillus cereus ATCC 14579], gi\|298965...	4.0E-47	[1..255]	[1..255]
gi\|47555698, gi\|... - gi\|47567721\|ref\|ZP_00238431.1\| methlytransferase, ubiE/COQ5 family, putative [Bacillus cereus G9241]...	1.0E-46	[1..257]	[1..257]
gi\|42781985, gi\|... - gi\|42781985\|ref\|NP_979232.1\| UbiE/COQ5 family methlytransferase [Bacillus cereus ATCC 10987], gi\|427...	4.0E-46	[1..255]	[1..255]
gi\|229167624, gi... - gi\|229167624\|ref\|ZP_04295361.1\| Methyltransferase type 11 [Bacillus cereus AH621], gi\|228615844\|gb\|E... gi\|228749238, gi... - gi\|229012150\|ref\|ZP_04169329.1\| Methyltransferase type 11 [Bacillus mycoides DSM 2048], gi\|228749238... gi\|89207283, gi\|... - gi\|89207283\|ref\|ZP_01185827.1\| UbiE/COQ5 methyltransferase [Bacillus weihenstephanensis KBAB4], gi\|8...	2.0E-44	[2..257]	[5..260]
gi\|238787950, gi... - gi\|77974356\|ref\|ZP_00829897.1\| COG0500: SAM-dependent methyltransferases [Yersinia frederiksenii ATC...	2.0E-42	[2..255]	[6..255]
gi\|238726742, gi... - gi\|77978387\|ref\|ZP_00833817.1\| COG0500: SAM-dependent methyltransferases [Yersinia intermedia ATCC 2...	2.0E-42	[2..254]	[6..254]
gi\|69275373, gi\|... - gi\|69275373\|ref\|ZP_00611285.1\| UbiE/COQ5 methyltransferase [Mesorhizobium sp. BNC1], gi\|68193813\|gb\|...	3.0E-42	[2..256]	[6..256]
gi\|15614894, gi\|... - gi\|15614894\|ref\|NP_243197.1\| hypothetical protein BH2331 [Bacillus halodurans C-125], gi\|10174951\|db... gi\|25329833 - pir\|\|C83941 hypothetical protein BH2331 [imported] - Bacillus halodurans (strain C-125)	6.0E-42	[3..256]	[4..257]

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Predicted Domain #1

Region A:
Residues: [1-258]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKEELVKQQ FGNNAEKYVK SKIHAKGPDL QYVVQQVESR HNNRLLDIAT GGGHVANVLA  60
   61 PLFKEVVALD LTEKMLENAK KFIISNGHEN VSFVAGNAES LPFSDSSFDT ITCRIAAHHF 120
  121 TNPAQFIYEV NRTLEDNGLF ILIDNVSPEN NEFDIFYNFI EKKRDPSHER ALKKTEWITL 180
  181 LEKNGLQMQS CLTFDKKFEF DWWCDMMNVP LQKRVKLTEC MMKTSVEMQE FFNIQYENNK 240
  241 IISFYTEMAL FVCKKVQH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.522879
Match:	1vl5A
Description:	Crystal structure of hypothetical protein (BH2331) from Bacillus halodurans at 1.95 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.62377578202456	bayes_pls_golite062009
transferase activity	1.27388514102581	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	1.11446137064593	bayes_pls_golite062009
methyltransferase activity	1.0967819849268	bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity	0.495483488913306	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: