YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262777, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	268 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262777, gi|....

Description	E-value	Query Range	Subject Range
gi\|118478160, gi... - gi\|118478160\|ref\|YP_895311.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al Hak... gi\|229185021, gi... - gi\|229185021\|ref\|ZP_04312211.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BGSC 6E1], gi\|22... gi\|228691538, gi... - gi\|229091810\|ref\|ZP_04223008.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-42], gi\|22... gi\|52142709, gi\|... - gi\|52142709\|ref\|YP_084121.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L], gi\|51976178\|... gi\|225864779, gi... - gi\|225864779\|ref\|YP_002750157.1\| putative glycosyl hydrolase, family 25 [Bacillus cereus 03BB102], g... gi\|196026009, gi... - gi\|196043700\|ref\|ZP_03110938.1\| putative glycosyl hydrolase, family 25 [Bacillus cereus 03BB108], gi...	1.0E-85	[1..268]	[1..268]
gi\|228627060, gi... - gi\|229156383\|ref\|ZP_04284477.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 4342], gi\|2... gi\|47552778, gi\|... - gi\|47570556\|ref\|ZP_00241179.1\| peptidase, U32 family [Bacillus cereus G9241], gi\|47552778\|gb\|EAL1120... gi\|228773827, gi... - gi\|228985898\|ref\|ZP_04146046.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar t...	2.0E-85	[1..268]	[1..268]
gi\|49479119, gi\|... - gi\|49479119\|ref\|YP_036889.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar konk...	8.0E-85	[1..268]	[1..268]
gi\|227816643, gi... - gi\|227816643\|ref\|YP_002816652.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacill... gi\|229602150, gi... - gi\|229602150\|ref\|YP_002865091.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacill... gi\|254686876 - gi\|254686876\|ref\|ZP_05150734.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|254725956, gi... - gi\|254725956\|ref\|ZP_05187738.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|254738897 - gi\|254738897\|ref\|ZP_05196599.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|254743719, gi... - gi\|254744488\|ref\|ZP_05202167.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|254756258 - gi\|254756258\|ref\|ZP_05208287.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|254762077 - gi\|254762077\|ref\|ZP_05213926.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|167529822, gi... - gi\|167634748\|ref\|ZP_02393067.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|164713482, gi... - gi\|165870648\|ref\|ZP_02215301.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|49177415, gi\|... - gi\|49183488\|ref\|YP_026740.1\| prophage LambdaBa04, glycosyl hydrolase family protein 25, putative [Ba... gi\|170688551, gi... - gi\|170688551\|ref\|ZP_02879757.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|47525755, gi\|... - gi\|47525755\|ref\|YP_017104.1\| prophage lambdaba04, glycosyl hydrolase family protein 25, putative [Ba... gi\|167511234, gi... - gi\|167640840\|ref\|ZP_02399099.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|172080372, gi... - gi\|177654987\|ref\|ZP_02936681.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|170127857, gi... - gi\|170707079\|ref\|ZP_02897535.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|190561324, gi... - gi\|190567537\|ref\|ZP_03020450.1\| putative prophage LambdaBa04, glycosyl hydrolase, family 25 [Bacillu... gi\|30260647, gi\|... - gi\|30260647\|ref\|NP_843024.1\| prophage LambdaBa04, glycosyl hydrolase family protein 25, putative [Ba... gi\|21398435, gi\|... - gi\|65317908\|ref\|ZP_00390867.1\| COG3757: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Bacillus anthraci...	9.0E-84	[1..268]	[1..265]
gi\|228655438, gi... - gi\|229128163\|ref\|ZP_04257145.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-Cer4], gi\|2... gi\|29896494, gi\|... - gi\|30020941\|ref\|NP_832572.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579], gi\|298...	1.0E-76	[1..265]	[1..271]
gi\|152976640, gi... - gi\|89202390\|ref\|ZP_01181115.1\| Glycoside hydrolase, family 25 [Bacillus cereus subsp. cytotoxis NVH ...	8.0E-76	[1..265]	[1..268]
gi\|42781905, gi\|... - gi\|42781905\|ref\|NP_979152.1\| U32 family peptidase [Bacillus cereus ATCC 10987], gi\|42737829\|gb\|AAS41...	1.0E-74	[1..265]	[1..271]
gi\|74487932, gi\|... - gi\|75764578\|ref\|ZP_00744033.1\| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar is...	5.0E-74	[1..265]	[1..271]
gi\|163941491, gi... - gi\|89206929\|ref\|ZP_01185479.1\| Glycoside hydrolase, family 25 [Bacillus weihenstephanensis KBAB4], g...	7.0E-72	[1..266]	[1..265]

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Predicted Domain #1

Region A:
Residues: [1-268]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYIVDISKW NGNINWDVAA PQLDFVIARV QDGSNYIDPL YKSYVQAMKT RNIPFGNYAF  60
   61 CRFISIADAK KEAQDFWNRG DKSATVWVAD VEVKTMDDMI AGTQAFIDEL RRLGAKKVGL 120
  121 YVGHHMYGPF GMANVKSDFV WIPRYGGNKP AYPCDIWQYT ETGNVPGIGK CDLNQLIGNK 180
  181 PLSWFTESVP KQENIQAQVS KQNIIQSGAF SPYETPDVMG ALTSLKMTAT FILQSDGLTY 240
  241 FVTEPTSDTQ LNALKSWLDR KGWWYEVK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.69897
Match:	2nw0A
Description:	No description for 2nw0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits