YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257352, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	446 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257352, gi|....

Description	E-value	Query Range	Subject Range
gi\|42781837, gi\|... - gi\|42781837\|ref\|NP_979084.1\| hypothetical protein BCE_2780 [Bacillus cereus ATCC 10987], gi\|42737761...	0.0	[1..446]	[1..446]
gi\|49332416, gi\|... - gi\|49480860\|ref\|YP_036843.1\| hypothetical protein BT9727_2517 [Bacillus thuringiensis serovar konkuk...	0.0	[1..446]	[1..446]
gi\|52142758, gi\|... - gi\|52142758\|ref\|YP_084071.1\| hypothetical protein BCZK2482 [Bacillus cereus E33L], gi\|51976227\|gb\|AA...	0.0	[1..446]	[1..446]
gi\|65320050, gi\|... - gi\|65320050\|ref\|ZP_00393009.1\| hypothetical protein Bant_01003406 [Bacillus anthracis str. A2012], r...	0.0	[1..446]	[1..446]
gi\|47554282, gi\|... - gi\|47569013\|ref\|ZP_00239703.1\| hypothetical protein BCE_G9241_2696 [Bacillus cereus G9241], gi\|47554...	0.0	[1..446]	[1..446]
gi\|228592636, gi... - gi\|229190846\|ref\|ZP_04317838.1\| hypothetical protein bcere0002_25110 [Bacillus cereus ATCC 10876], g... gi\|229179034, gi... - gi\|229179034\|ref\|ZP_04306391.1\| hypothetical protein bcere0005_23870 [Bacillus cereus 172560W], gi\|2... gi\|229150961, gi... - gi\|229150961\|ref\|ZP_04279172.1\| hypothetical protein bcere0011_25100 [Bacillus cereus m1550], gi\|228... gi\|29896426, gi\|... - gi\|30020873\|ref\|NP_832504.1\| hypothetical protein BC2752 [Bacillus cereus ATCC 14579], gi\|29896426\|g... gi\|229045448, gi... - gi\|229045448\|ref\|ZP_04192105.1\| hypothetical protein bcere0027_24710 [Bacillus cereus AH676], gi\|228... gi\|228953080, gi... - gi\|228953080\|ref\|ZP_04115140.1\| hypothetical protein bthur0006_24690 [Bacillus thuringiensis serovar... gi\|228655366, gi... - gi\|229128091\|ref\|ZP_04257073.1\| hypothetical protein bcere0015_25370 [Bacillus cereus BDRD-Cer4], gi... gi\|228673185, gi... - gi\|229110199\|ref\|ZP_04239773.1\| hypothetical protein bcere0018_24530 [Bacillus cereus Rock1-15], gi\|... gi\|218230925, gi... - gi\|218230925\|ref\|YP_002367467.1\| germination protein YpeB [Bacillus cereus B4264], gi\|218158882\|gb\|A... gi\|229079939, gi... - gi\|229079939\|ref\|ZP_04212470.1\| hypothetical protein bcere0023_25900 [Bacillus cereus Rock4-2], gi\|2... gi\|229070226, gi... - gi\|229070226\|ref\|ZP_04203478.1\| hypothetical protein bcere0025_24150 [Bacillus cereus F65185], gi\|22...	0.0	[1..446]	[1..446]
gi\|163940500, gi... - gi\|89209415\|ref\|ZP_01187837.1\| Propeptide, PepSY amd peptidase M4 [Bacillus weihenstephanensis KBAB4... gi\|228649677, gi... - gi\|229133642\|ref\|ZP_04262468.1\| hypothetical protein bcere0014_25600 [Bacillus cereus BDRD-ST196], g...	0.0	[1..446]	[1..446]
gi\|152975662, gi... - gi\|89202333\|ref\|ZP_01181059.1\| Propeptide, PepSY amd peptidase M4 [Bacillus cereus subsp. cytotoxis ...	0.0	[1..446]	[1..446]
gi\|221323731 - gi\|221323731\|ref\|ZP_03605025.1\| hypothetical protein BsubsS_12567 [Bacillus subtilis subsp. subtilis... YPEB_BACSU - Sporulation protein YpeB OS=Bacillus subtilis (strain 168) GN=ypeB PE=1 SV=2 YPEB_BACSU - Sporulation protein ypeB OS=Bacillus subtilis GN=ypeB PE=1 SV=2 gi\|221314533 - gi\|221314533\|ref\|ZP_03596338.1\| hypothetical protein BsubsN3_12512 [Bacillus subtilis subsp. subtili... gi\|221319455 - gi\|221319455\|ref\|ZP_03600749.1\| hypothetical protein BsubsJ_12438 [Bacillus subtilis subsp. subtilis...	0.0	[1..445]	[1..447]
YPEB_BACHD - Sporulation protein ypeB OS=Bacillus halodurans GN=BH1632 PE=3 SV=1 YPEB_BACHD - Sporulation protein YpeB OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9...	0.0	[1..446]	[1..445]

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Predicted Domain #1

Region A:
Residues: [1-64]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRGIIIVLL TIGVVGTGYW GYKEHQEKNA VLIRAENSYQ RAFHDLAYEV DLLHDKIGTT  60
   61 LAMN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [65-213]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRASLSPALA DVWRLTSEAR SDVGQLPLTL MPFNKTEEFL ANIGDFSYRA AIRDLEKEPL  60
   61 NDQEYKTLQT LYSNAGNIQD ELRKVQHLVL KNNLRWMDVE MALASNRDPA DNTIIDGLKT 120
  121 VEKNVTSYSS TNFGPTFTSA QKNKKGGFE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [214-286]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEGKAISKDE AGKIAKSFLN LKGNEKVEVE KSGKGAKESF YSVKIKDEAT NNKFYMDITG  60
   61 KGGYPIWVMN NRE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	3.721246
Match:	PF03413.5
Description:	No description for PF03413.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [287-371]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKEQKISLND AGSKGLKFLK DHKFNNMELY DSSQYDNVGV FTYVVNVNGV RIYPEAIQMK  60
   61 IALDDGSIVG FSAKEYLASH QKRTV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	4.60206
Match:	PF03413.5
Description:	No description for PF03413.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [372-446]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSAKLTAAEA RKKINPDVKV MEERKAVVVN DLHNEVLCYE FVGTLGKDTY QIFINANSGA  60
   61 EEKVKKMQAV EKIYD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	3.958607
Match:	PF03413.5
Description:	No description for PF03413.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits