YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262702, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	852 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262702, gi|....

Description	E-value	Query Range	Subject Range
gi\|52142777, gi\|... - gi\|52142777\|ref\|YP_084052.1\| pullulanase [Bacillus cereus E33L], gi\|51976246\|gb\|AAU17796.1\| pullulan...	0.0	[3..852]	[1..850]
gi\|49330721, gi\|... - gi\|49479165\|ref\|YP_036824.1\| pullulanase [Bacillus thuringiensis serovar konkukian str. 97-27], gi\|4...	0.0	[1..852]	[1..852]
gi\|47569858, gi\|... - gi\|47569858\|ref\|ZP_00240526.1\| alpha-dextran endo-1,6-alpha-glucosidase [Bacillus cereus G9241], gi\|...	0.0	[3..852]	[1..850]
gi\|30020856, gi\|... - gi\|30020856\|ref\|NP_832487.1\| pullulanase [Bacillus cereus ATCC 14579], gi\|29896408\|gb\|AAP09688.1\| Pu...	0.0	[1..852]	[2..853]
gi\|42737742, gi\|... - gi\|42781818\|ref\|NP_979065.1\| pullulanase, putative [Bacillus cereus ATCC 10987], gi\|42737742\|gb\|AAS4...	0.0	[1..848]	[1..848]
gi\|21400626, gi\|... - gi\|65320031\|ref\|ZP_00392990.1\| COG1523: Type II secretory pathway, pullulanase PulA and related glyc...	0.0	[130..852]	[2..724]
gi\|37788269 - gi\|37788269\|gb\|AAP45012.1\| pullulanase [Anaerobranca horikoshii]	0.0	[3..847]	[1..864]
gi\|44662948 - gi\|44662948\|gb\|AAS47565.1\| pullulanase type I [Anaerobranca gottschalkii]	0.0	[3..848]	[1..865]
PULA_THEMA - Pullulanase OS=Thermotoga maritima GN=pulA PE=1 SV=2 PULA_THEMA - Pullulanase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=pulA PE=1 SV...	0.0	[38..848]	[20..843]
gi\|4836215 - gi\|4836215\|gb\|AAD30387.1\|AF096862_1 pullulanase type I [Fervidobacterium pennivorans]	0.0	[10..847]	[11..847]

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Predicted Domain #1

Region A:
Residues: [1-852]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQITKRLINK TVLLLTLIVM LSSIFSFQSV KAVSNSKTTE VIIHYKEQSG NTKDWNLWIW  60
   61 GENSSGKSYE FTGEDEFGKY AKINIDGDYN RLGFIIRTNE WEKDGGDRWI ENIKDGRAEV 120
  121 WILSGDEKVY NSKPSSDLSI QKATIDSFHE ITVTTNVPFN IKEKKIEMEG IKIKSISPYD 180
  181 INSGDITNKV KIITEQKIDL KQTYKVKIEN LADTNTEIGK VIRSEEFDYL FYYGGNDLGN 240
  241 IYTPQHTKFR VWAPTASEAK LVTYKKWNDK IGTEINMQQG EKGTWKAELK GNQKGLYYTY 300
  301 KVKIGDKWTE AVDPYARAAS VNGDKGAVVD LEETNPKKWN TNKKPKLKNP EDAIIYELHV 360
  361 RDLSIQPESG IKQKGKYLGV TEKGTKGPEG VKTGLDHMKD LGVTHVQLLP IFDYASVNEE 420
  421 KVNEPQYNWG YDPKNFNVPE GSYSTNPYEP TVRITELKQM IQTLHDNNLR VVMDVVYNHM 480
  481 YNAAESNFHK LVPGYYYRYN EDGTFANGTG VGNDTASERT MMRKFMIDSV TYWAKEYNLD 540
  541 GFRFDLMGIH DYETMNEIRK AVNQIDPSII LHGEGWDLNT PLAAELKANQ KNAEKMKGIA 600
  601 HFNDNIRDGL KGSVFEEKEN GFVNGKENME DRIKKGITAG IDYDTNSSTY QDPEQVLTYV 660
  661 EAHDNHTLWD KLELTNPGDS EEVRKQIHKL SSSILLTSQG IPFLHAGQEF MRTKYGDHNS 720
  721 YKSPDSINQM DWLRRATFNN EVDYMKGLIE LRKKYPAFRM TSAEQIKTHV SFIDAPKNTV 780
  781 TYTIEGNKHE YFTVAHNANR EAVEITLPSK GPWKVLVDGK QAGSKPLYVV HDNKIKVPAL 840
  841 SSIVLKSEKP IK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	107.0
Match:	2fgzA
Description:	No description for 2fgzA was found.

Predicted functions:

Term	Confidence	Notes
hydrolase activity, acting on glycosyl bonds	3.1190602686215	bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds	2.98773241907716	bayes_pls_golite062009
catalytic activity	2.22613067995402	bayes_pls_golite062009
hydrolase activity	1.97740088175981	bayes_pls_golite062009
1,4-alpha-glucan branching enzyme activity	0.72343541139639	bayes_pls_golite062009
chitinase activity	0.67854733864231	bayes_pls_golite062009
glucosidase activity	0.58717079348538	bayes_pls_golite062009
hexosaminidase activity	0.16438321606077	bayes_pls_golite062009
cation transmembrane transporter activity	0.15340916113777	bayes_pls_golite062009
amylase activity	0.0914002140078796	bayes_pls_golite062009
alpha-amylase activity	0.0521244165288097	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: