YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262671, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	131 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262671, gi|....

Description	E-value	Query Range	Subject Range
Y854_PYRHO - UPF0076 protein PH0854 OS=Pyrococcus horikoshii GN=PH0854 PE=1 SV=2 Y854_PYRHO - RutC family protein PH0854 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBR...	7.0E-42	[2..129]	[1..124]
gi\|3257265, gi\|1... - gi\|3257265\|dbj\|BAA29948.1\| 137aa long hypothetical protein [Pyrococcus horikoshii OT3], gi\|14590714\|... gi\|7444996 - gi\|7444996\|pir\|\|B71136 hypothetical protein PH0854 - Pyrococcus horikoshii	7.0E-42	[2..129]	[12..135]
gi\|186685855, gi... - gi\|23127695\|ref\|ZP_00109558.1\| COG1357: Uncharacterized low-complexity proteins [Nostoc punctiforme ...	6.0E-41	[1..130]	[301..429]
RIDA_PYRFU - 2-iminobutanoate/2-iminopropanoate deaminase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / ...	7.0E-41	[2..129]	[1..124]
Y1251_PYRAB, YC5... - (Q9UZA3) Hypothetical UPF0076 protein PYRAB12510, UPF0076 protein PYRAB12510 OS=Pyrococcus abyssi GN... Y1251_PYRAB - RutC family protein PYRAB12510 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB12510 PE=3 SV=1	3.0E-40	[1..129]	[1..125]
gi\|25533215 - pir\|\|AF2289 hypothetical protein all3869 [imported] - Nostoc sp. (strain PCC 7120) gi\|17231361, gi\|... - gi\|17231361\|ref\|NP_487909.1\| hypothetical protein all3869 [Nostoc sp. PCC 7120], gi\|17133003\|dbj\|BAB...	9.0E-39	[1..130]	[245..373]
gi\|37197949, gi\|... - gi\|37679206\|ref\|NP_933815.1\| putative translation initiation inhibitor [Vibrio vulnificus YJ016], gi... gi\|27363650, gi\|... - gi\|27363650\|ref\|NP_759178.1\| putative translation initiation inhibitor [Vibrio vulnificus CMCP6], gi...	6.0E-38	[2..129]	[1..125]
gi\|145952961, gi... - gi\|90573901\|ref\|ZP_01230409.1\| hypothetical protein CdifQ_02002769 [Clostridium difficile QCD-32g58]... gi\|255651025 - gi\|255651025\|ref\|ZP_05397927.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|115251566, gi... - gi\|126700129\|ref\|YP_001089026.1\| putative translation inhibitor endoribonuclease [Clostridium diffic... gi\|255656496 - gi\|255656496\|ref\|ZP_05401905.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|255101674 - gi\|255101674\|ref\|ZP_05330651.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|255307543 - gi\|255307543\|ref\|ZP_05351714.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|255315240 - gi\|255315240\|ref\|ZP_05356823.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|255517909 - gi\|255517909\|ref\|ZP_05385585.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|254976108 - gi\|254976108\|ref\|ZP_05272580.1\| putative translation inhibitor endoribonuclease [Clostridium diffici... gi\|255093498 - gi\|255093498\|ref\|ZP_05322976.1\| putative translation inhibitor endoribonuclease [Clostridium diffici...	7.0E-38	[1..130]	[1..126]
gi\|30020821, gi\|... - gi\|30020821\|ref\|NP_832452.1\| translation initiation inhibitor [Bacillus cereus ATCC 14579], gi\|29896... gi\|229145275, gi... - gi\|229145275\|ref\|ZP_04273664.1\| Translation initiation inhibitor [Bacillus cereus BDRD-ST24], gi\|228... gi\|229128038, gi... - gi\|229128038\|ref\|ZP_04257020.1\| Translation initiation inhibitor [Bacillus cereus BDRD-Cer4], gi\|228...	2.0E-37	[1..131]	[1..131]
gi\|88947236, gi\|... - gi\|88947236\|ref\|ZP_01150243.1\| YjgF-like protein [Desulfotomaculum reducens MI-1], gi\|88923307\|gb\|EA...	2.0E-37	[1..130]	[1..126]

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Predicted Domain #1

Region A:
Residues: [1-131]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKKFINPKT MPPTFGYSHV VEASNAKRTI YISGQVAINT DGQIVGINDL ATQTRQVFEN  60
   61 IKIALETSDL NFNDVVKLTF FLTDISQMAI VRDIRDQYID TNNPPASSAV EVRKLINDNL 120
  121 LIEIEAIAVA N

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.30103
Match:	2dyyA
Description:	No description for 2dyyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits