YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257283, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	287 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257283, gi|....

Description	E-value	Query Range	Subject Range
gi\|49477820, gi\|... - gi\|49477820\|ref\|YP_036772.1\| glycerophosphoryl diester phosphodiesterase [Bacillus thuringiensis ser...	2.0E-78	[1..287]	[1..287]
gi\|42781761, gi\|... - gi\|42781761\|ref\|NP_979008.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus cereus ...	5.0E-78	[1..286]	[1..286]
gi\|51976296, gi\|... - gi\|52142827\|ref\|YP_084004.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus E33L], gi\|...	9.0E-78	[1..287]	[1..287]
gi\|74488083, gi\|... - gi\|75764430\|ref\|ZP_00743932.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus thuringiensis s... gi\|228901215, gi... - gi\|228901215\|ref\|ZP_04065414.1\| Glycerophosphoryl diester phosphodiesterase [Bacillus thuringiensis ...	1.0E-77	[1..286]	[1..286]
gi\|21400559, gi\|... - gi\|65319971\|ref\|ZP_00392930.1\| COG0584: Glycerophosphoryl diester phosphodiesterase [Bacillus anthra...	9.0E-77	[1..287]	[1..287]
gi\|163940424, gi... - gi\|89208634\|ref\|ZP_01187130.1\| Glycerophosphodiester phosphodiesterase [Bacillus weihenstephanensis ...	1.0E-76	[1..286]	[1..286]
gi\|30020800, gi\|... - gi\|30020800\|ref\|NP_832431.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus ATCC 14579...	3.0E-73	[1..285]	[1..285]
gi\|221312349 - gi\|221312349\|ref\|ZP_03594154.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis (strain 168) GN=glpQ PE=3 SV=1 GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis GN=glpQ PE=3 SV=1 gi\|221321546 - gi\|221321546\|ref\|ZP_03602840.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... gi\|221317282 - gi\|221317282\|ref\|ZP_03598576.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp...	5.0E-72	[1..286]	[1..291]
gi\|25487769 - pir\|\|D84112 glycerophosphoryl diester phosphodiesterase glpQ [imported] - Bacillus halodurans (strai... gi\|10176324, gi\|... - gi\|15616262\|ref\|NP_244567.1\| glycerophosphoryl diester phosphodiesterase [Bacillus halodurans C-125]...	1.0E-70	[1..279]	[2..274]
gi\|52787931, gi\|... - gi\|52787931\|ref\|YP_093760.1\| GlpQ [Bacillus licheniformis ATCC 14580], gi\|52350433\|gb\|AAU43067.1\| Gl...	4.0E-70	[1..286]	[1..294]

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Predicted Domain #1

Region A:
Residues: [1-287]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIYIVTII CTFIVLGTFI FHKVNELKYT KAINQSNHIK NIAHRGASAY APEHTIAAYK  60
   61 LGQQLKGDYI EIDLQMTKDG HLVAMHDETV NRTTNGTGLV KEHTLEELKQ LNAGSTYNKK 120
  121 YPNLAKKEYE NAKVPTLEEV IEVFGHDANY YIETKSPDEY PGMEEKLLEI INHYEIQDKV 180
  181 IIQSFSEVSL QKLHSLHVNI PLAQLLSYKK AVQLTESEIK KYKTYCIGLG MNYKYIDAAY 240
  241 VKRIKKHGLE VHPFTVDNET DMKKLILWGV DGMFTNYPDR LYSLLKS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.522879
Match:	2oogA
Description:	No description for 2oogA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits