YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257099, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	333 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257099, gi|....

Description	E-value	Query Range	Subject Range
gi\|86604872 - gi\|86604872\|ref\|YP_473635.1\| threonine dehydratase [Cyanobacteria bacterium Yellowstone A-Prime] gi\|86553414, gi\|... - gi\|86604872\|ref\|YP_473635.1\| threonine dehydratase [Synechococcus sp. JA-3-3Ab], gi\|86553414\|gb\|ABC9...	2.0E-86	[13..333]	[7..328]
gi\|87281645, gi\|... - gi\|87303848\|ref\|ZP_01086553.1\| threonine dehydratase [Synechococcus sp. WH 5701], gi\|87281645\|gb\|EAQ...	6.0E-86	[8..333]	[4..328]
gi\|77868036, gi\|... - gi\|77953083\|ref\|ZP_00817494.1\| Threonine dehydratase I [Marinobacter aquaeolei VT8], gi\|77868036\|gb\|...	2.0E-85	[8..333]	[4..328]
gi\|90415223\|ref\|... - threonine dehydratase [marine gamma proteobacterium HTCC2207] gi\|90415223, gi\|... - gi\|90415223\|ref\|ZP_01223157.1\| threonine dehydratase [marine gamma proteobacterium HTCC2207], gi\|903...	6.0E-85	[16..333]	[10..328]
gi\|56477351, gi\|... - gi\|56477351\|ref\|YP_158940.1\| threonine dehydratase [Aromatoleum aromaticum EbN1], gi\|56313394\|emb\|CA...	8.0E-84	[2..333]	[1..331]
gi\|78184641, gi\|... - gi\|78184641\|ref\|YP_377076.1\| threonine dehydratase [Synechococcus sp. CC9902], gi\|78168935\|gb\|ABB260...	2.0E-83	[6..333]	[1..327]
gi\|90413761, gi\|... - gi\|90413761\|ref\|ZP_01221749.1\| threonine dehydratase [Photobacterium profundum 3TCK], gi\|90325230\|gb...	5.0E-83	[9..333]	[18..340]
gi\|116065912, gi... - gi\|116070507\|ref\|ZP_01467776.1\| threonine dehydratase [Synechococcus sp. BL107], gi\|116065912\|gb\|EAU...	6.0E-83	[6..333]	[1..327]
gi\|54310634, gi\|... - gi\|54310634\|ref\|YP_131654.1\| threonine dehydratase [Photobacterium profundum SS9], gi\|46915077\|emb\|C...	8.0E-83	[9..333]	[18..340]
gi\|60502212, gi\|... - gi\|60502212\|gb\|AAX22214.1\| threonine deaminase [Nicotiana attenuata], gi\|12539611\|gb\|AAG59585.1\|AF22...	2.0E-82	[13..333]	[106..426]

Back

Predicted Domain #1

Region A:
Residues: [1-333]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITKKLPLHI DDIKKAQSIL DRNARKTPLV KSFYLTSKTG GEIHLKLENM QLTGSFKFRG  60
   61 AFNKMSQLTD QEKERGVIAC SAGNHAQGIA LSAHLLGIKS KIVMPISAPQ AKVDATKGYG 120
  121 SEVVLHGETF DDAKAKCEEI IRETGETYLH PYDDVEVMAG QGTIGLDILD DMWDVDTVIV 180
  181 PIGGGGIISG IAVALKSFNP SIHIIGVQAE NVHGMKASYD KGKIIEHYEA PTIADGCAVK 240
  241 IPGNLTFEVV KELVDDIVTV SEKELEVAMK DLLQRGKAVV EGAGALATAA LLAGKVDTYI 300
  301 KEKKVVAVIS GGNVDLQRIS SVCEQFFVAN EVE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.30103
Match:	2gn0A
Description:	No description for 2gn0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits