YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256991, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256991, gi|....

Description	E-value	Query Range	Subject Range
gi\|67665704, gi\|... - gi\|67665704\|ref\|ZP_00462964.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia HI2424]... gi\|67093808, gi\|... - gi\|67658720\|ref\|ZP_00456090.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia AU 1054...	7.0E-41	[2..206]	[247..448]
gi\|65319651 - gi\|65319651\|ref\|ZP_00392610.1\| COG1280: Putative threonine efflux protein [Bacillus anthracis str. A...	3.0E-40	[1..210]	[20..229]
gi\|76581979, gi\|... - gi\|76817506\|ref\|YP_336716.1\| LysE family protein [Burkholderia pseudomallei 1710b], gi\|76581979\|gb\|A...	8.0E-40	[2..199]	[441..628]
gi\|30020423, gi\|... - gi\|30020423\|ref\|NP_832054.1\| amino acid transporter LysE [Bacillus cereus ATCC 14579], gi\|29895974\|g... gi\|228673622, gi... - gi\|229109777\|ref\|ZP_04239362.1\| Homoserine/threonine efflux protein [Bacillus cereus Rock1-15], gi\|2... gi\|228632866, gi... - gi\|229150557\|ref\|ZP_04278772.1\| Homoserine/threonine efflux protein [Bacillus cereus m1550], gi\|2286... gi\|228638652, gi... - gi\|229144930\|ref\|ZP_04273327.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-ST24], gi\|... gi\|228655809, gi... - gi\|229127732\|ref\|ZP_04256721.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-Cer4], gi\|... gi\|218235872, gi... - gi\|218235872\|ref\|YP_002367038.1\| putative homoserine/threonine efflux protein [Bacillus cereus B4264...	9.0E-40	[1..210]	[1..210]
gi\|49477632, gi\|... - gi\|49477632\|ref\|YP_036458.1\| homoserine/threonine efflux protein [Bacillus thuringiensis serovar kon... gi\|218903490, gi... - gi\|218903490\|ref\|YP_002451324.1\| putative homoserine/threonine efflux protein [Bacillus cereus AH820... gi\|196029173, gi... - gi\|196039914\|ref\|ZP_03107217.1\| putative homoserine/threonine efflux protein [Bacillus cereus NVH059...	1.0E-39	[1..210]	[1..210]
gi\|52143121, gi\|... - gi\|52143121\|ref\|YP_083708.1\| homoserine/threonine efflux protein [Bacillus cereus E33L], gi\|51976590...	5.0E-39	[1..210]	[1..210]
gi\|111617741, gi... - gi\|111617741\|ref\|ZP_01404769.1\| Lysine exporter protein (LYSE/YGGA) [Acidovorax avenae subsp. citrul...	1.0E-38	[18..209]	[715..903]
gi\|89152072, gi\|... - gi\|89199797\|ref\|ZP_01178554.1\| Lysine exporter protein (LYSE/YGGA) [Bacillus cereus subsp. cytotoxis...	2.0E-38	[2..210]	[1..209]
gi\|89156522, gi\|... - gi\|89205506\|ref\|ZP_01184075.1\| Lysine exporter protein (LYSE/YGGA) [Bacillus weihenstephanensis KBAB...	4.0E-38	[2..210]	[1..209]
gi\|74488302, gi\|... - gi\|75764208\|ref\|ZP_00743770.1\| Transporter, LysE family [Bacillus thuringiensis serovar israelensis ... gi\|228900953, gi... - gi\|228900953\|ref\|ZP_04065166.1\| Homoserine/threonine efflux protein [Bacillus thuringiensis IBL 4222...	6.0E-38	[1..210]	[1..210]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIENYFLFII MSICLIILPG PDTAMATKNT LVAGKVGGVK TVFGTCIALL IHTLAAVIGL  60
   61 SALIVKSALL FSIFKYVGAL YLIYIGIKAL LAVRNKEGVD TNDISLHNED EHTSCFRQGF 120
  121 LTNLLNPKVA VFFLTFLPQF LNPNHNTFIQ LLVMGLTYLI LTVIWFAFYI FLIDKISAFM 180
  181 KKPKTQRYIQ GLTGIVLIGF GIKLAFEKSN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	43.721246
Match:	PF01810.9
Description:	No description for PF01810.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits