YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256988, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	569 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256988, gi|....

Description	E-value	Query Range	Subject Range
gi\|49479443, gi\|... - gi\|49479443\|ref\|YP_036455.1\| acyl-CoA dehydrogenase [Bacillus thuringiensis serovar konkukian str. 9... gi\|196029146, gi... - gi\|196039887\|ref\|ZP_03107190.1\| acyl-CoA dehydrogenase [Bacillus cereus NVH0597-99], gi\|196029146\|gb... gi\|195993433, gi... - gi\|196033753\|ref\|ZP_03101164.1\| acyl-CoA dehydrogenase [Bacillus cereus W], gi\|195993433\|gb\|EDX57390... gi\|229121901, gi... - gi\|229121901\|ref\|ZP_04251120.1\| Acyl-CoA dehydrogenase [Bacillus cereus 95/8201], gi\|228661550\|gb\|EE... gi\|228945958, gi... - gi\|228945958\|ref\|ZP_04108300.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar monterrey BGS... gi\|228933642, gi... - gi\|228933642\|ref\|ZP_04096492.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar andalousiensi...	0.0	[1..569]	[1..569]
gi\|47565708, gi\|... - gi\|47565708\|ref\|ZP_00236748.1\| acyl-CoA dehydrogenase, short-chain specific [Bacillus cereus G9241],...	0.0	[1..569]	[1..569]
gi\|51976594, gi\|... - gi\|52143125\|ref\|YP_083705.1\| acyl-CoA dehydrogenase [Bacillus cereus E33L], gi\|51976594\|gb\|AAU18144....	0.0	[1..569]	[1..569]
gi\|42781443, gi\|... - gi\|42781443\|ref\|NP_978690.1\| acyl-CoA dehydrogenase [Bacillus cereus ATCC 10987], gi\|42737365\|gb\|AAS...	0.0	[1..569]	[1..569]
gi\|228820190, gi... - gi\|228939490\|ref\|ZP_04102078.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar berliner ATCC... gi\|229127729, gi... - gi\|229127729\|ref\|ZP_04256718.1\| Acyl-CoA dehydrogenase [Bacillus cereus BDRD-Cer4], gi\|228655806\|gb\|... gi\|228978956, gi... - gi\|228978956\|ref\|ZP_04139321.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis Bt407], gi\|228780738\|... gi\|228972343, gi... - gi\|228972343\|ref\|ZP_04132954.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar thuringiensis... gi\|29895971, gi\|... - gi\|30020420\|ref\|NP_832051.1\| Acyl-CoA dehydrogenase [Bacillus cereus ATCC 14579], gi\|29895971\|gb\|AAP...	0.0	[1..569]	[1..569]
gi\|89156525, gi\|... - gi\|89205509\|ref\|ZP_01184078.1\| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central re...	0.0	[1..569]	[47..615]
gi\|228794313, gi... - gi\|228965323\|ref\|ZP_04126415.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar sotto str. T0... gi\|228900950, gi... - gi\|228900950\|ref\|ZP_04065163.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis IBL 4222], gi\|2288586... gi\|75762983, gi\|... - gi\|75762983\|ref\|ZP_00742780.1\| Acyl-CoA dehydrogenase [Bacillus thuringiensis serovar israelensis AT... gi\|218543929, gi... - gi\|218897304\|ref\|YP_002445715.1\| acyl-CoA dehydrogenase [Bacillus cereus G9842], gi\|218543929\|gb\|ACK...	0.0	[1..569]	[1..569]
gi\|89152076, gi\|... - gi\|89199801\|ref\|ZP_01178558.1\| Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central re...	0.0	[1..569]	[1..569]
gi\|10176110, gi\|... - gi\|15616048\|ref\|NP_244353.1\| butyryl-CoA dehydrogenase [Bacillus halodurans C-125], gi\|10176110\|dbj\|... gi\|25486715 - pir\|\|F84085 butyryl-CoA dehydrogenase BH3486 [imported] - Bacillus halodurans (strain C-125)	0.0	[12..569]	[14..594]

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Predicted Domain #1

Region A:
Residues: [1-569]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKTKLPWDE FFSLNKDVKH AFFTPEDFSG DEDLIAKTTE QFVKQEIVPQ MENIEQHNYK  60
   61 VSRQLFEKAG ELGLLSIEVP EEYGGFELGK AVSGLVAEKM GYAGAFSVSF NIHAGVGTLP 120
  121 YIYYGTKEQK EKYLPKIASG EWIGAYALTE PNAGSDALSA KTSAVLNEDG TAWKLNGEKQ 180
  181 WITNAHMADV YVVFAKTNKG MTAFIVERTC EGVSIGLEEK KMGIKGSSTA TLILEDVVIP 240
  241 AENVLGEVGK GHHVALNILN FARLKLAFGN IGTAKQAIGL SVQYGKERKQ FQTELVDFTM 300
  301 IQEKIANMII ATYGAESAAY RTAGVIDEAI HESDEDLMKK MSQFAIECAL NKVNASETLG 360
  361 HIVDEAVQIH GGYGYMQEYE VELLYRDARI SRIFEGTNEI NRLTVAKMLM KQMEQIEDTE 420
  421 VEIDVANVER NHRYILLAKK LLKQSLKTLS KTPGLKIDQE QEYSRVLSNM LTDVYVMESA 480
  481 FLRTSKAISK NGEGKERTKQ MITDVICEEG YRKVEEAAIS ILSAAVTEEQ DRHVILAEIR 540
  541 QLLVPLYTNV FTKKREIAKA IINRGKYIV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	110.0
Match:	2uxwA
Description:	No description for 2uxwA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits