YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262316, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	252 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262316, gi|....

Description	E-value	Query Range	Subject Range
gi\|51976619, gi\|... - gi\|52143150\|ref\|YP_083678.1\| sporulation-control protein [Bacillus cereus E33L], gi\|51976619\|gb\|AAU1... gi\|49479490, gi\|... - gi\|49479490\|ref\|YP_036418.1\| sporulation-control protein [Bacillus thuringiensis serovar konkukian s... gi\|254722297 - gi\|254722297\|ref\|ZP_05184085.1\| sporulation-control protein [Bacillus anthracis str. A1055] gi\|170687040, gi... - gi\|170687040\|ref\|ZP_02878259.1\| putative sporulation-control protein Spo0M [Bacillus anthracis str. ... gi\|254684889 - gi\|254684889\|ref\|ZP_05148749.1\| sporulation-control protein [Bacillus anthracis str. CNEVA-9066] gi\|167633094, gi... - gi\|167633094\|ref\|ZP_02391420.1\| putative sporulation-control protein Spo0M [Bacillus anthracis str. ...	0.0	[1..252]	[1..251]
gi\|47565668, gi\|... - gi\|47565668\|ref\|ZP_00236708.1\| sporulation-control protein [Bacillus cereus G9241], gi\|47557304\|gb\|E...	0.0	[1..252]	[1..251]
gi\|75763123, gi\|... - gi\|75763123\|ref\|ZP_00742898.1\| Sporulation-control protein [Bacillus thuringiensis serovar israelens...	0.0	[1..252]	[1..251]
gi\|29895942, gi\|... - gi\|30020391\|ref\|NP_832022.1\| sporulation-control protein [Bacillus cereus ATCC 14579], gi\|29895942\|g...	0.0	[1..252]	[1..251]
gi\|89156556, gi\|... - gi\|89205540\|ref\|ZP_01184109.1\| SpoOM [Bacillus weihenstephanensis KBAB4], gi\|89156556\|gb\|EAR76555.1\|...	0.0	[1..252]	[1..251]
gi\|22778639, gi\|... - gi\|23100406\|ref\|NP_693873.1\| sporulation control protein [Oceanobacillus iheyensis HTE831], gi\|22778...	6.0E-94	[1..247]	[1..245]
gi\|17231645, gi\|... - gi\|17231645\|ref\|NP_488193.1\| hypothetical protein alr4153 [Nostoc sp. PCC 7120], gi\|17133288\|dbj\|BAB... gi\|25367938 - pir\|\|AB2325 hypothetical protein alr4153 [imported] - Nostoc sp. (strain PCC 7120)	7.0E-91	[1..240]	[21..256]
gi\|11293005 - pir\|\|B82372 SpoOM-related protein VC0039 [imported] - Vibrio cholerae (strain N16961 serogroup O1) gi\|15640071, gi\|... - gi\|9654432\|gb\|AAF93217.1\| SpoOM-related protein [Vibrio cholerae O1 biovar El Tor str. N16961], gi\|1... gi\|227011958, gi... - gi\|227116508\|ref\|YP_002818404.1\| SpoOM-related protein [Vibrio cholerae O395], gi\|227011958\|gb\|ACP08... gi\|121629815, gi... - gi\|121727871\|ref\|ZP_01680930.1\| SpoOM-related protein [Vibrio cholerae V52], gi\|121629815\|gb\|EAX6223... gi\|121548512, gi... - gi\|121587266\|ref\|ZP_01677039.1\| SpoOM-related protein [Vibrio cholerae 2740-80], gi\|121548512\|gb\|EAX... gi\|254851604, gi... - gi\|254851604\|ref\|ZP_05240954.1\| SpoOM-related protein [Vibrio cholerae MO10], gi\|254847309\|gb\|EET257... gi\|124117680, gi... - gi\|153224314\|ref\|ZP_01954371.1\| SpoOM-related protein [Vibrio cholerae MAK 757], gi\|124117680\|gb\|EAY... gi\|153821921, gi... - gi\|153821921\|ref\|ZP_01974588.1\| SpoOM-related protein [Vibrio cholerae B33], gi\|126520541\|gb\|EAZ7776... gi\|153817578, gi... - gi\|153817578\|ref\|ZP_01970245.1\| SpoOM-related protein [Vibrio cholerae NCTC 8457], gi\|126511846\|gb\|E... gi\|227008164, gi... - gi\|227080276\|ref\|YP_002808827.1\| SpoOM-related protein [Vibrio cholerae M66-2], gi\|227008164\|gb\|ACP0...	2.0E-89	[3..241]	[22..265]
gi\|229346171, gi... - gi\|229517108\|ref\|ZP_04406554.1\| hypothetical protein VCC_001129 [Vibrio cholerae RC9], gi\|229346171\|... gi\|229354112, gi... - gi\|229508837\|ref\|ZP_04398328.1\| hypothetical protein VCE_000242 [Vibrio cholerae B33], gi\|229354112\|... gi\|229508324, gi... - gi\|229508324\|ref\|ZP_04397828.1\| hypothetical protein VCF_003559 [Vibrio cholerae BX 330286], gi\|2293... gi\|229606599, gi... - gi\|229606599\|ref\|YP_002877247.1\| hypothetical protein VCD_001508 [Vibrio cholerae MJ-1236], gi\|22936... gi\|75829918, gi\|... - gi\|75829918\|ref\|ZP_00759207.1\| COG4326: Sporulation control protein [Vibrio cholerae MO10], gi\|11618... gi\|75816177 - gi\|75816177\|ref\|ZP_00746655.1\| COG4326: Sporulation control protein [Vibrio cholerae V52] gi\|75828111 - gi\|75828111\|ref\|ZP_00757546.1\| COG4326: Sporulation control protein [Vibrio cholerae O395]	2.0E-89	[3..241]	[5..248]
gi\|28808075, gi\|... - gi\|28899823\|ref\|NP_799428.1\| SpoOM-related protein [Vibrio parahaemolyticus RIMD 2210633], gi\|288080... gi\|28808075 - gi\|28808075\|dbj\|BAC61312.1\| SpoOM-related protein [Vibrio parahaemolyticus RIMD 2210633]	3.0E-89	[2..251]	[6..261]

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Predicted Domain #1

Region A:
Residues: [1-252]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQKFLASVG IGNAKVDTVL EKDEYIVGEE ILGKVHITGG SVSQQIESIY LTLSTSYIRE  60
   61 VDDKKITTTT YDLERVRLTE PFSVEPNEKR EIPFSFKMPV ETPLTLGMKT VWIHTGLDIK 120
  121 RSIDPSDRDY IQVLPNALLN SVLESVNQLG FKARHIECEE LPYRLRKQVP FAQEFEFVPV 180
  181 SGQYYGKLDE LELLILPSAY DRLEIIMEVD RKSRGLAGLF AEALDLDEKV IRFTVTNEDI 240
  241 PTMKETINNY IF

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.5
Match:	2fauA
Description:	No description for 2fauA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits