YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262238, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	235 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262238, gi|....

Description	E-value	Query Range	Subject Range
gi\|196029413, gi... - gi\|196039710\|ref\|ZP_03107014.1\| aspartate racemase family protein [Bacillus cereus NVH0597-99], gi\|1... gi\|228826127, gi... - gi\|228933529\|ref\|ZP_04096380.1\| Aspartate racemase [Bacillus thuringiensis serovar andalousiensis BG... gi\|228914826, gi... - gi\|228914826\|ref\|ZP_04078435.1\| Aspartate racemase [Bacillus thuringiensis serovar pulsiensis BGSC 4... gi\|49329106, gi\|... - gi\|49477550\|ref\|YP_036336.1\| aspartate racemase [Bacillus thuringiensis serovar konkukian str. 97-27... gi\|218534989, gi... - gi\|218903367\|ref\|YP_002451201.1\| aspartate racemase family protein [Bacillus cereus AH820], gi\|21853...	6.0E-65	[1..231]	[1..231]
gi\|30020311, gi\|... - gi\|30020311\|ref\|NP_831942.1\| aspartate racemase [Bacillus cereus ATCC 14579], gi\|29895862\|gb\|AAP0914...	1.0E-63	[1..230]	[1..230]
gi\|74491146, gi\|... - gi\|75761380\|ref\|ZP_00741353.1\| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC 3... gi\|228858740, gi... - gi\|228900814\|ref\|ZP_04065029.1\| hypothetical protein bthur0014_20160 [Bacillus thuringiensis IBL 422...	2.0E-63	[1..231]	[1..231]
gi\|47570153, gi\|... - gi\|47570153\|ref\|ZP_00240809.1\| aspartate racemase [Bacillus cereus G9241], gi\|47553172\|gb\|EAL11567.1...	3.0E-63	[1..231]	[1..231]
gi\|163940018, gi... - gi\|89207876\|ref\|ZP_01186405.1\| Aspartate racemase [Bacillus weihenstephanensis KBAB4], gi\|89154170\|g...	5.0E-63	[1..231]	[1..231]
gi\|52143230, gi\|... - gi\|52143230\|ref\|YP_083598.1\| aspartate racemase [Bacillus cereus E33L], gi\|51976699\|gb\|AAU18249.1\| a...	1.0E-62	[1..231]	[1..231]
gi\|42781317, gi\|... - gi\|42781317\|ref\|NP_978564.1\| aspartate racemase family protein [Bacillus cereus ATCC 10987], gi\|4273...	2.0E-62	[1..231]	[1..231]
gi\|89086768, gi\|... - gi\|89098523\|ref\|ZP_01171406.1\| aspartate racemase [Bacillus sp. NRRL B-14911], gi\|89086768\|gb\|EAR658...	4.0E-62	[1..232]	[4..235]
gi\|24376434, gi\|... - gi\|24378582\|ref\|NP_720537.1\| putative amino acid recemase [Streptococcus mutans UA159], gi\|24376434\|...	4.0E-60	[1..230]	[1..230]
gi\|50120232, gi\|... - gi\|50120232\|ref\|YP_049399.1\| putative aspartate/glutamate racemase [Pectobacterium atrosepticum SCRI...	2.0E-59	[2..230]	[4..233]

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Predicted Domain #1

Region A:
Residues: [1-235]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIGLIGGM SWESTAEYYR IINEEIKSRL GGLHSAKCLI NSVDFEEIER YQSSGDWDST  60
   61 GEILENAAYS LQKGGADFII ICTNTMHKVV EKIKENIHIP ILHIADATAK EIKRKDIQTV 120
  121 GLLGTKYTME QDFYKSRIEE NHIKVVVPSE KDRDKVNEVI YTELCLGKIT SQSREYYKRV 180
  181 IENLIQEGAK GIILGCTEIG LLIKQEDVSV PIFDTTHIHA VEAVHFALLE YNYIM

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	59.0
Match:	1jflA
Description:	Aspartate racemase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits