YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256725, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	196 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256725, gi|....

Description	E-value	Query Range	Subject Range
gi\|134299758, gi... - gi\|88944800\|ref\|ZP_01148024.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Desulfotomaculum...	2.0E-48	[2..193]	[5..203]
gi\|67917134, gi\|... - gi\|67917134\|ref\|ZP_00510806.1\| Phosphoglycerate/bisphosphoglycerate mutase [Clostridium thermocellum...	2.0E-46	[3..196]	[38..238]
gi\|146273747, gi... - gi\|98662370\|dbj\|GAA00697.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476776...	2.0E-46	[2..193]	[4..202]
gi\|91785167, gi\|... - gi\|91785167\|ref\|YP_560373.1\| phosphoglycerate mutase [Burkholderia xenovorans LB400], gi\|91689121\|gb...	3.0E-45	[2..195]	[4..208]
gi\|83572867, gi\|... - gi\|83589953\|ref\|YP_429962.1\| phosphoglycerate mutase [Moorella thermoacetica ATCC 39073], gi\|8357286...	8.0E-45	[2..196]	[5..205]
gi\|158320599, gi... - gi\|158320599\|ref\|YP_001513106.1\| phosphoglycerate mutase [Alkaliphilus oremlandii OhILAs], gi\|158140...	7.0E-44	[6..194]	[1..195]
gi\|7451675 - pir\|\|A70471 phosphoglycerate mutase 1 - Aquifex aeolicus gi\|15606984, gi\|... - gi\|2984221\|gb\|AAC07750.1\| phosphoglycerate mutase [Aquifex aeolicus VF5], gi\|15606984\|ref\|NP_214366....	7.0E-44	[1..196]	[2..204]
gi\|23493975, gi\|... - gi\|25028689\|ref\|NP_738743.1\| bifunctional RNase H/acid phosphatase [Corynebacterium efficiens YS-314...	1.0E-43	[2..195]	[235..435]
gi\|84356812, gi\|... - gi\|84356812\|ref\|ZP_00981647.1\| COG0406: Fructose-2,6-bisphosphatase [Burkholderia cenocepacia PC184]...	2.0E-43	[2..195]	[5..209]

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Predicted Domain #1

Region A:
Residues: [1-196]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQILLIRHGE SEADILNVHE GRADFELTEK GRQQVQRLVQ KVKADFPPDF IWASTLKRAR  60
   61 ETGETLAEGI GCPIQLEEEL MEFNNGVQAG LSFEEAKKYP EPKFLHDRFE NGESFIEFRM 120
  121 RIEGIFSKIV TENTYDRIAI VAHGGVINSL LRAFFKMPIS MDYYFKMGDT GISLIEIDGE 180
  181 QKTVHFINDT NHLHGM

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.09691
Match:	1xq9A
Description:	Structure of Phosphoglycerate Mutase from Plasmodium falciparum at 2.6 Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoglycerate mutase activity	2.44130212442914	bayes_pls_golite062009
catalytic activity	1.74758487942433	bayes_pls_golite062009
phosphofructokinase activity	1.32754415318102	bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases	1.3155280505393	bayes_pls_golite062009
6-phosphofructo-2-kinase activity	0.940317463927411	bayes_pls_golite062009
hydrolase activity	0.849651362333977	bayes_pls_golite062009
isomerase activity	0.78897146524644	bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity	0.65789048948205	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.60968648160451	bayes_pls_golite062009
carbohydrate kinase activity	0.31535814970436	bayes_pls_golite062009
intramolecular transferase activity	0.31181714941139	bayes_pls_golite062009
alpha-ribazole-5'-P phosphatase activity	0.174640929208739	bayes_pls_golite062009
carbohydrate phosphatase activity	0.11293479631677	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: